RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SERPINA13PQ6UXR4 307 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 OR2A12Q8NGT7 310 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 SORCS1Q8WY21 1168 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 CENPNQ96H22 339 aaPredicted RBP18.33■□□□□ 0.53
USP49-202ENST00000373010 SEPHS2Q99611 448 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 LRTM1Q9HBL6 345 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 OAZ3Q9UMX2 235 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 LAMA3Q16787 3333 aa18.33■□□□□ 0.53
USP49-202ENST00000373010 GRXCR2A6NFK2 248 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 DLGAP1O14490 977 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 DFNA5O60443 496 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 OR56A5P0C7T3 313 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 TYRP14679 529 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 GGT5P36269 586 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 GNPDA1P46926 289 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 BOP1Q14137 746 aaKnown RBP18.33■□□□□ 0.52
USP49-202ENST00000373010 NADK2Q4G0N4 442 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 NAIF1Q69YI7 327 aaPredicted RBP18.33■□□□□ 0.52
USP49-202ENST00000373010 GDPD4Q6W3E5 623 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 TRIM46Q7Z4K8 759 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 ADIPOR2Q86V24 386 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 CHCHD4Q8N4Q1 142 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 KRTCAP2Q8N6L1 136 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 NAT16Q8N8M0 369 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 IRF7Q92985 503 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 SCAMP4Q969E2 229 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 CEP44Q9C0F1 390 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 MYO7AQ13402 2215 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 CROCCQ5TZA2 2017 aa18.33■□□□□ 0.52
USP49-202ENST00000373010 AKT1P31749 480 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 APOFQ13790 326 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 SLC5A9Q2M3M2 681 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 FAM174BQ3ZCQ3 159 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 AASDHQ4L235 1098 aaPredicted RBP18.32■□□□□ 0.52
USP49-202ENST00000373010 INTS11Q5TA45 600 aaKnown RBP18.32■□□□□ 0.52
USP49-202ENST00000373010 TMEM215Q68D42 235 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 GLYATQ6IB77 296 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 SUSD1Q6UWL2 747 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 GALNT15Q8N3T1 639 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 CLHC1Q8NHS4 586 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 SLC32A1Q9H598 525 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 ACTR8Q9H981 624 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 VAPAQ9P0L0 249 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 SMIM31A0A1B0GVY4 71 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 WDR47O94967 919 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 CLDN9O95484 217 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 FXNQ16595 210 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 LY6G5CQ5SRR4 150 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 CYB5D2Q8WUJ1 264 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 SLC13A3Q8WWT9 602 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 TFAP2CQ92754 450 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 USP7Q93009 1102 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 PYCR2Q96C36 320 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 ZBTB18Q99592 522 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 DPY30Q9C005 99 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 MTG2Q9H4K7 406 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 TDP1Q9NUW8 608 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 SMOXQ9NWM0 555 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 PCDHB3Q9Y5E6 796 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 HCFC2Q9Y5Z7 792 aa18.32■□□□□ 0.52
USP49-202ENST00000373010 MTCL1Q9Y4B5 1905 aaKnown RBP18.32■□□□□ 0.52
USP49-202ENST00000373010 RNF103-CHMP3A0A140T963 221 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 CXorf51AA0A1B0GTR3 108 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 IFRD1O00458 451 aaPredicted RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 PFKLP17858 780 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 NTHL1P78549 312 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 ATP6AP1Q15904 470 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 SPANXN4Q5MJ08 99 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 KRT80Q6KB66 452 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 HSD11B1LQ7Z5J1 315 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 PROSER1Q86XN7 944 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 DTWD1Q8N5C7 304 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 EMILIN2Q9BXX0 1053 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 ANKRD60Q9BZ19 345 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 SPHK2Q9NRA0 654 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 ACOX3O15254 700 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 KCNH1O95259 989 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 PDYNP01213 254 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 GNAO1P09471 354 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 ATP1B2P14415 290 aaPredicted RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 ZNF648Q5T619 568 aaPredicted RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 METTL2BQ6P1Q9 378 aaKnown RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 DNAJC14Q6Y2X3 702 aaPredicted RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 RBM44Q6ZP01 1051 aaKnown RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 PACRGLQ8N7B6 248 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 MFSD2AQ8NA29 543 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 PAPD5Q8NDF8 572 aaKnown RBP18.31■□□□□ 0.52
USP49-202ENST00000373010 NSMCE2Q96MF7 247 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 C9orf16Q9BUW7 83 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 SLC12A9Q9BXP2 914 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 ACPTQ9BZG2 426 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 TRIM4Q9C037 500 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 CAAP1Q9H8G2 361 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 PARVBQ9HBI1 364 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 OLAHQ9NV23 265 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 KLHL42Q9P2K6 505 aa18.31■□□□□ 0.52
USP49-202ENST00000373010 TTC34A8MYJ7 566 aa18.3■□□□□ 0.52
USP49-202ENST00000373010 UMPSP11172 480 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms