RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CSF2RAP15509 400 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 PLA2G4EQ3MJ16 856 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 RGL4Q8IZJ4 473 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 LIX1Q8N485 282 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 ADI1Q9BV57 179 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 DPY30Q9C005 99 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 CCL26Q9Y258 94 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 LDLRP01130 860 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 AKT1P31749 480 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 MERTKQ12866 999 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 LARP7Q4G0J3 582 aaKnown RBP eCLIP28.33■■■□□ 2.13
SSBP3-204ENST00000371320 TRIML2Q8N7C3 387 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 KREMEN2Q8NCW0 462 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 OR8J3Q8NGG0 315 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 ZFP28Q8NHY6 868 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 ZNF641Q96N77 438 aaPredicted RBP28.33■■■□□ 2.13
SSBP3-204ENST00000371320 SLC29A3Q9BZD2 475 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 RBM38Q9H0Z9 239 aaKnown RBP28.33■■■□□ 2.13
SSBP3-204ENST00000371320 BRD9Q9H8M2 597 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 ZNHIT2Q9UHR6 403 aa28.33■■■□□ 2.13
SSBP3-204ENST00000371320 CLDN9O95484 217 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 CXCL14O95715 111 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 LSAMPQ13449 338 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 FAM174BQ3ZCQ3 159 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 CDKL4Q5MAI5 379 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 ZDHHC20Q5W0Z9 365 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 ASTLQ6HA08 431 aaPredicted RBP28.32■■■□□ 2.12
SSBP3-204ENST00000371320 TMEM25Q86YD3 366 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 GALNT13Q8IUC8 556 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 DTWD1Q8N5C7 304 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 GLB1L3Q8NCI6 653 aaPredicted RBP28.32■■■□□ 2.12
SSBP3-204ENST00000371320 OSCP1Q8WVF1 389 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 RNF145Q96MT1 663 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 CHID1Q9BWS9 393 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 SLCO3A1Q9UIG8 710 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 DMTF1Q9Y222 760 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 PDE10AQ9Y233 779 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 LTBP2Q14767 1821 aa28.32■■■□□ 2.12
SSBP3-204ENST00000371320 ZFC3H1O60293 1989 aaKnown RBP28.32■■■□□ 2.12
SSBP3-204ENST00000371320 CCL16O15467 120 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 MT-ND1P03886 318 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 C1SP09871 688 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 C7P10643 843 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 SH3BGRP55822 239 aaPredicted RBP28.31■■■□□ 2.12
SSBP3-204ENST00000371320 LRRC73Q5JTD7 316 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 UBE2R2Q712K3 238 aaPredicted RBP28.31■■■□□ 2.12
SSBP3-204ENST00000371320 HOMEZQ8IX15 550 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 USP7Q93009 1102 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 CEP44Q9C0F1 390 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 SLC32A1Q9H598 525 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 ACTR8Q9H981 624 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 CLK4Q9HAZ1 481 aaKnown RBP28.31■■■□□ 2.12
SSBP3-204ENST00000371320 IGLV3-16A0A075B6K0 115 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 GNAO1P09471 354 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 MAPKAPK3Q16644 382 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 SLC22A17Q8WUG5 538 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 SKA2Q8WVK7 121 aaPredicted RBP28.31■■■□□ 2.12
SSBP3-204ENST00000371320 MTFMTQ96DP5 389 aaKnown RBP28.31■■■□□ 2.12
SSBP3-204ENST00000371320 VAPAQ9P0L0 249 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 B4GALT6Q9UBX8 382 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 PIKFYVEQ9Y2I7 2098 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 DENND4CQ5VZ89 1909 aa28.31■■■□□ 2.12
SSBP3-204ENST00000371320 EIF3FO00303 357 aaPredicted RBP28.3■■■□□ 2.12
SSBP3-204ENST00000371320 EI24O14681 340 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 DFNA5O60443 496 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 KRT6AP02538 564 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 KRT6BP04259 564 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 ADH1AP07327 375 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 CDH1P12830 882 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 PFKLP17858 780 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 MYF6P23409 242 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 AOAHP28039 575 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 KRT6CP48668 564 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 SPINT3P49223 89 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 HSPA14Q0VDF9 509 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 DET1Q7L5Y6 550 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 HM13Q8TCT9 377 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 GTF2H4Q92759 462 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 C1orf109Q9NX04 203 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 ASIC5Q9NY37 505 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 SLC8A2Q9UPR5 921 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 NEUROG3Q9Y4Z2 214 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 NEDD8-MDP1E9PL57 170 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 GMNNO75496 209 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 IL6P05231 212 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 ZNF23P17027 643 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 ITGB8P26012 769 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 CCR2P41597 374 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 CPSF6Q16630 551 aaKnown RBP eCLIP28.3■■■□□ 2.12
SSBP3-204ENST00000371320 TTC23LQ6PF05 361 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 CHST14Q8NCH0 376 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 VPS50Q96JG6 964 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 EMILIN2Q9BXX0 1053 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 PARVBQ9HBI1 364 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 SAGE1Q9NXZ1 904 aa28.3■■■□□ 2.12
SSBP3-204ENST00000371320 EFCAB14O75071 495 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 ANXA6P08133 673 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 GGT5P36269 586 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 SLC36A3Q495N2 470 aa28.29■■■□□ 2.12
SSBP3-204ENST00000371320 Q6ZVU0 165 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms