RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 XKR4Q5GH76 650 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 LAIR1Q6GTX8 287 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 MRNIPQ6NTE8 343 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 CYP20A1Q6UW02 462 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 C17orf99Q6UX52 265 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 GPRIN3Q6ZVF9 776 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 LDB1Q86U70 411 aaPredicted RBP10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 ZNF540Q8NDQ6 660 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 SETD6Q8TBK2 473 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 COPS5Q92905 334 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 SMOQ99835 787 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 CCDC32Q9BV29 185 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 SPATC1LQ9H0A9 340 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 ACTL8Q9H568 366 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 FBXL12Q9NXK8 326 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 ZNF225Q9UK10 706 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 NUDT5Q9UKK9 219 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 CRYL1Q9Y2S2 319 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 PKP3Q9Y446 797 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 DOCK3Q8IZD9 2030 aa10.33□□□□□ -0.76
LYSMD1-201ENST00000368908 PDZK1P1A8MUH7 402 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 DFNA5O60443 496 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 GLP2RO95838 553 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 IGLV3-25P01717 112 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 USP17L7P0C7H9 530 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PRKACGP22612 351 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 CTSKP43235 329 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 HTR3AP46098 478 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 OR2B6P58173 313 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 FPGSQ05932 587 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 C19orf57Q0VDD7 668 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TYSND1Q2T9J0 566 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 CPZQ66K79 652 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 KDM4DQ6B0I6 523 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 KIAA1841Q6NSI8 718 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 NOTUMQ6P988 496 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 DET1Q7L5Y6 550 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 GPRIN1Q7Z2K8 1008 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TSPYL5Q86VY4 417 aaPredicted RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 GRPEL2Q8TAA5 225 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PITX2Q99697 317 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TRIM62Q9BVG3 475 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 VAPAQ9P0L0 249 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 UTS2RQ9UKP6 389 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 RIMKLBQ9ULI2 386 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 NDRG4Q9ULP0 352 aaKnown RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PCDHGB6Q9Y5F9 930 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PCDHGA3Q9Y5H0 932 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 GMPPBQ9Y5P6 360 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PTCH2Q9Y6C5 1203 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 MAU2Q9Y6X3 613 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PLXNB2O15031 1838 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 SMIM28A0A1B0GU29 152 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 HHLA1C9JL84 531 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 LDB2O43679 373 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 SEC22BO75396 215 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TXNP10599 105 aaKnown RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PFKLP17858 780 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 ALOX12P18054 663 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 MZF1P28698 734 aaPredicted RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 GTF2E2P29084 291 aaKnown RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 MAGEA11P43364 429 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 RAD51Q06609 339 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TTLL4Q14679 1199 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 MFSD10Q14728 455 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PCBP1Q15365 356 aaKnown RBP eCLIP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TBCEQ15813 527 aaPredicted RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 RBBP7Q16576 425 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 FAM110CQ1W6H9 321 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 SMU1Q2TAY7 513 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PROX2Q3B8N5 592 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 ZFP69Q49AA0 526 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 ATG9BQ674R7 924 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 IL31Q6EBC2 164 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 SIGIRRQ6IA17 410 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 Q6ZSR9 355 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 ZMIZ2Q8NF64 920 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 DNAJB8Q8NHS0 232 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 SLC13A3Q8WWT9 602 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PYCR2Q96C36 320 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 CDADC1Q9BWV3 514 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 C6orf62Q9GZU0 229 aaPredicted RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 RIBC2Q9H4K1 309 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 ZBTB20Q9HC78 741 aaPredicted RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 PNMA8BQ9ULN7 279 aaPredicted RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 RNF6Q9Y252 685 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 TRAPPC4Q9Y296 219 aa10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 WBP11Q9Y2W2 641 aaKnown RBP10.32□□□□□ -0.76
LYSMD1-201ENST00000368908 WASH4PA8MWX3 477 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 E9PQ18 207 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 DSCR3O14972 297 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CAPN5O15484 640 aaPredicted RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CREG1O75629 220 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 PRDX3P30048 256 aaKnown RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 HOXD11P31277 338 aaPredicted RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 AKT1P31749 480 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 KRT20P35900 424 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 LILRA4P59901 499 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 EIF4EBP2Q13542 120 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms