RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ANP32EQ9BTT0 268 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 MAK16Q9BXY0 300 aaKnown RBP15.34■□□□□ 0.05
DDX55-202ENST00000354291 TSPY26PQ9H489 355 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 NHEJ1Q9H9Q4 299 aaPredicted RBP15.34■□□□□ 0.05
DDX55-202ENST00000354291 SLC6A20Q9NP91 592 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 FAM8A1Q9UBU6 413 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 FBXL4Q9UKA2 621 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 POMT2Q9UKY4 750 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 ZNF711Q9Y462 761 aa15.34■□□□□ 0.05
DDX55-202ENST00000354291 LRRD1A4D1F6 860 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 OR2AG2A6NM03 316 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 PCDH17O14917 1159 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 CNOT3O75175 753 aaKnown RBP15.33■□□□□ 0.04
DDX55-202ENST00000354291 UMODP07911 640 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 PVRP15151 417 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 PRDX3P30048 256 aaKnown RBP15.33■□□□□ 0.04
DDX55-202ENST00000354291 METRNLQ641Q3 311 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 MTFR2Q6P444 385 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 XKRXQ6PP77 449 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 RASGEF1AQ8N9B8 481 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.04
DDX55-202ENST00000354291 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.33■□□□□ 0.04
DDX55-202ENST00000354291 VPS35Q96QK1 796 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 CHP1Q99653 195 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 SPRTNQ9H040 489 aaPredicted RBP15.33■□□□□ 0.04
DDX55-202ENST00000354291 KIR3DX1Q9H7L2 352 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 MAGEE1Q9HCI5 957 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 NFKBIL1Q9UBC1 381 aaPredicted RBP15.33■□□□□ 0.04
DDX55-202ENST00000354291 NEU2Q9Y3R4 380 aa15.33■□□□□ 0.04
DDX55-202ENST00000354291 C19orf84I3L1E1 186 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 MFAP3LO75121 409 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 MSL3P1P0C860 447 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 CD1EP15812 388 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 ZFXP17010 805 aaPredicted RBP15.32■□□□□ 0.04
DDX55-202ENST00000354291 SLC1A1P43005 524 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 PPIDQ08752 370 aaKnown RBP15.32■□□□□ 0.04
DDX55-202ENST00000354291 ODF2Q5BJF6 829 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 FAM182AQ5T1J6 154 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 ZNF324BQ6AW86 544 aaPredicted RBP15.32■□□□□ 0.04
DDX55-202ENST00000354291 CDHR3Q6ZTQ4 885 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 CNGA4Q8IV77 575 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 CEP97Q8IW35 865 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 PLD5Q8N7P1 536 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 CHTF18Q8WVB6 975 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 DHCR7Q9UBM7 475 aaKnown RBP15.32■□□□□ 0.04
DDX55-202ENST00000354291 CDC23Q9UJX2 597 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 INTUQ9ULD6 942 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 HEY1Q9Y5J3 304 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 COLEC10Q9Y6Z7 277 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 DOCK10Q96BY6 2186 aa15.32■□□□□ 0.04
DDX55-202ENST00000354291 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 KCNK1O00180 336 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 APOL1O14791 398 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 AURKAO14965 403 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A9O60656 530 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 OR2B3O76000 313 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UNC5CO95185 931 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A6P19224 532 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A1P22309 533 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A4P22310 534 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 TDGF1P3P51864 188 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 IFI35P80217 286 aaPredicted RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 TLE4Q04727 773 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 SRSF11Q05519 484 aaKnown RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 PDK1Q15118 436 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 PCSK7Q16549 785 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 SLC9A4Q6AI14 798 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 RPUSD3Q6P087 351 aaKnown RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 BEND7Q8N7W2 519 aaPredicted RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 LCN9Q8WX39 176 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 NR4A3Q92570 626 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 AP1M1Q9BXS5 423 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 ZCCHC2Q9C0B9 1178 aaKnown RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 LHPPQ9H008 270 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A7Q9HAW7 530 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A10Q9HAW8 530 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 UGT1A8Q9HAW9 530 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 DDX56Q9NY93 547 aaKnown RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 DNMT3AQ9Y6K1 912 aaPredicted RBP15.31■□□□□ 0.04
DDX55-202ENST00000354291 AP1M2Q9Y6Q5 423 aa15.31■□□□□ 0.04
DDX55-202ENST00000354291 AKR1B15C9JRZ8 316 aaPredicted RBP15.3■□□□□ 0.04
DDX55-202ENST00000354291 MATN2O00339 956 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 POLBP06746 335 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 KIR3DL1P43629 444 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 AP1B1Q10567 949 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 TCEAL1Q15170 157 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 NKAIN1Q4KMZ8 207 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 FNBP1LQ5T0N5 605 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 RHBDD2Q6NTF9 364 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 MRPL14Q6P1L8 145 aaKnown RBP15.3■□□□□ 0.04
DDX55-202ENST00000354291 ANKRD12Q6UB98 2062 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 ISLR2Q6UXK2 745 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 DET1Q7L5Y6 550 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 CNTD1Q8N815 330 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 RNF214Q8ND24 703 aa15.3■□□□□ 0.04
DDX55-202ENST00000354291 THOC3Q96J01 351 aaKnown RBP15.3■□□□□ 0.04
DDX55-202ENST00000354291 TAAR6Q96RI8 345 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms