RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SDHAF2Q9NX18 166 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SLC7A8Q9UHI5 535 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 UGGT1Q9NYU2 1555 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SIPA1L3O60292 1781 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 ELOVL7A1L3X0 281 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 APOC4-APOC2K7ER74 178 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 QSOX1O00391 747 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ABCB7O75027 752 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SCAF4O95104 1147 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 APOC2P02655 101 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 DNASE1P24855 282 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PNPLA4P41247 253 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SH3PXD2AQ5TCZ1 1133 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PRAMEF13Q5VWM6 474 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 IDO2Q6ZQW0 420 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 GLT6D1Q7Z4J2 308 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PTAR1Q7Z6K3 402 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 CERS2Q96G23 380 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 APBA2Q99767 749 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 VRK1Q99986 396 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 OR51E2Q9H255 320 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ASF1BQ9NVP2 202 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 MGAT4CQ9UBM8 478 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 HELZP42694 1942 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 A0A0J9YVX5 310 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 TYMPP19971 482 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SLC16A2P36021 539 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 FAM69CQ0P6D2 419 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 MAP4K2Q12851 820 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ALG10BQ5I7T1 473 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ANGEL2Q5VTE6 544 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 PAOXQ6QHF9 649 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 LARGE2Q8N3Y3 721 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 OR4C5Q8NGB2 326 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 GLT1D1Q96MS3 346 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SAMD11Q96NU1 681 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ABHD14A-ACY1A0A1B0GW23 586 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CABYRO75952 493 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 IFNW1P05000 195 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SPAM1P38567 509 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ATXN1P54253 815 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 CYCSP99999 105 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 POU4F2Q12837 409 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 DCST1Q5T197 706 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 C16orf46Q6P387 395 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 NOXA1Q86UR1 476 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 KCNN1Q92952 543 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 HDAC10Q969S8 669 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CGREF1Q99674 301 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 SENP2Q9HC62 589 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 TRPS1Q9UHF7 1281 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ZNF230Q9UIE0 474 aaPredicted RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 FEM1BQ9UK73 627 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PCDHGA5Q9Y5G8 931 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 MYO3AQ8NEV4 1616 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PRR5-ARHGAP8B1AHC4 643 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 RAB36O95755 333 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 GKN3PP0CG01 181 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CFL1P23528 166 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 GYG1P46976 350 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ARHGAP8P85298 464 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CBWD3Q5JTY5 395 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 CBWD5Q5RIA9 395 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 RPL13AP3Q6NVV1 102 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 OR1J4Q8NGS1 313 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 MRPL45Q9BRJ2 306 aaKnown RBP6.08□□□□□ -1.44
VCAN-203ENST00000343200 YIPF4Q9BSR8 244 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 C17orf75Q9HAS0 396 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 GABBR1Q9UBS5 961 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 PCTPQ9UKL6 214 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 ADGRL2O95490 1459 aa6.08□□□□□ -1.44
VCAN-203ENST00000343200 H7C417 338 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 MAGEB4O15481 346 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 MT-CO2P00403 227 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 RAP2AP10114 183 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 AMPD1P23109 780 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 CLVS2Q5SYC1 327 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 FAM46CQ5VWP2 391 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 FBXO31Q5XUX0 539 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 ELP2Q6IA86 826 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ILDR2Q71H61 639 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SELENOMQ8WWX9 145 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 PTERQ96BW5 349 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 C10orf90Q96M02 699 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 NT5MQ9NPB1 228 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 SEMA4BQ9NPR2 832 aaPredicted RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 ABCB8Q9NUT2 735 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 GSKIPQ9P0R6 139 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 USP17L5A8MUK1 530 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 FOXN1O15353 648 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ICMTO60725 284 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ENDOUP21128 410 aaKnown RBP6.07□□□□□ -1.44
VCAN-203ENST00000343200 FMO3P31513 532 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 CSTF2P33240 577 aaKnown RBP eCLIP6.07□□□□□ -1.44
VCAN-203ENST00000343200 SYT16Q17RD7 645 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 CBWD6Q4V339 395 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 ASB18Q6ZVZ8 466 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 FAM83AQ86UY5 434 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 CPNE9Q8IYJ1 553 aa6.07□□□□□ -1.44
VCAN-203ENST00000343200 GPR65Q8IYL9 337 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms