RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 RALGDSQ12967 914 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PUS10Q3MIT2 529 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MINDY4Q4G0A6 757 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GLYATQ6IB77 296 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PRSS55Q6UWB4 352 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PAMR1Q6UXH9 720 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 RNF148Q8N7C7 305 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 OR6K2Q8NGY2 324 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 LRRC46Q96FV0 321 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 C1QTNF1Q9BXJ1 281 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 NEUROD4Q9HD90 331 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SPATA7Q9P0W8 599 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 A0A1W2PQ45 241 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 A0A1W2PQY0 241 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TRIM43BA6NCK2 446 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 STX16-NPEPL1H3BU86 382 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 STX16O14662 325 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 KRT36O76013 467 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 CHRNA1P02708 482 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GSTM3P21266 225 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 NR4A1P22736 598 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 OXTRP30559 389 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MNDAP41218 407 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ARHGDIBP52566 201 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ERVK-8P63133 956 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 EVX2Q03828 476 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 FBXO43Q4G163 708 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 COX18Q8N8Q8 333 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 RASGEF1AQ8N9B8 481 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 C10orf82Q8WW14 230 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PNPLA2Q96AD5 504 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MOAP1Q96BY2 351 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 NXNL1Q96CM4 212 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 C17orf62Q9BQA9 187 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GPATCH1Q9BRR8 931 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SPATA9Q9BWV2 254 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 WDR12Q9GZL7 423 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 REXO4Q9GZR2 422 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 CRISPLD1Q9H336 500 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SLCO1B3Q9NPD5 702 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 RNF19AQ9NV58 838 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MRPL39Q9NYK5 338 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 DAPK2Q9UIK4 370 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TRPM3Q9HCF6 1732 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ZNF142P52746 1687 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SAGP10523 405 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 DGKEP52429 567 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SLC25A3Q00325 362 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 RIPPLY1Q0D2K3 151 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ATG14Q6ZNE5 492 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SERINC5Q86VE9 423 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 COX4I2Q96KJ9 171 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 KLHL25Q9H0H3 589 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TNKS2Q9H2K2 1166 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MKKSQ9NPJ1 570 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 CREBZFQ9NS37 354 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TMEM248Q9NWD8 314 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 FCF1Q9Y324 198 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TLL2Q9Y6L7 1015 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MYO9BQ13459 2157 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MARF1Q9Y4F3 1742 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 INPPL1O15357 1258 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 KDELR3O43731 214 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GATBO75879 557 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PRAMEF12O95522 483 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 FADS2O95864 444 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GSRP00390 522 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 CTSKP43235 329 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 HSPA7P48741 367 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 NUMBP49757 651 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 EEFSECP57772 596 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GMFBP60983 142 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SMCO1Q147U7 214 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ZBTB6Q15916 424 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SLC35G1Q2M3R5 365 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 FAM214AQ32MH5 1076 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MYLK3Q32MK0 819 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PRAMEF14Q5SWL7 426 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PRAMEF13Q5VWM6 474 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ANO7Q6IWH7 933 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 GDF6Q6KF10 455 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 FSTL4Q6MZW2 842 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 DCUN1D3Q8IWE4 304 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TMEM145Q8NBT3 493 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 BPIFB6Q8NFQ5 453 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ADAMTS18Q8TE60 1221 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PIH1D2Q8WWB5 315 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 KIAA1143Q96AT1 154 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 PPP1R14BQ96C90 147 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 TSGA13Q96PP4 275 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 CHCHD6Q9BRQ6 235 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 WRAP53Q9BUR4 548 aaKnown RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SLC32A1Q9H598 525 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 POLR3BQ9NW08 1133 aaPredicted RBP7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MS4A12Q9NXJ0 267 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 ZIM2Q9NZV7 527 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SCML1Q9UN30 329 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 MYH7BA7E2Y1 1941 aa7.58□□□□□ -1.2
ATP2B4-201ENST00000341360 SLC31A1O15431 190 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms