RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PCBP2Q15366 365 aaKnown RBP eCLIP16.94■□□□□ 0.3
CLDN4-201ENST00000340958 ENPP7Q6UWV6 458 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 MTDHQ86UE4 582 aaKnown RBP16.94■□□□□ 0.3
CLDN4-201ENST00000340958 ZNF483Q8TF39 744 aaPredicted RBP16.94■□□□□ 0.3
CLDN4-201ENST00000340958 RHBDF1Q96CC6 855 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 C1QTNF3Q9BXJ4 246 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 NUF2Q9BZD4 464 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 CHRDQ9H2X0 955 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 OSGEPL1Q9H4B0 414 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 STN1Q9H668 368 aaKnown RBP16.94■□□□□ 0.3
CLDN4-201ENST00000340958 TM7SF3Q9NS93 570 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 ABCF3Q9NUQ8 709 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 TRAF6Q9Y4K3 522 aa16.94■□□□□ 0.3
CLDN4-201ENST00000340958 TMEM233B4DJY2 109 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 UBFD1O14562 309 aaKnown RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SERPINB3P29508 390 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 MAGEA9P43362 315 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 GNPDA1P46926 289 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 HNMTP50135 292 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 NUBP1P53384 320 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 TCF15Q12870 199 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 MTAPQ13126 283 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 CDKL4Q5MAI5 379 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 VWA5B1Q5TIE3 1220 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 C11orf96Q7Z7L8 435 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 TEX9Q8N6V9 391 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 EBF4Q9BQW3 602 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 CD244Q9BZW8 370 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 RASSF4Q9H2L5 321 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 DPEP2Q9H4A9 486 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 NOL11Q9H8H0 719 aaKnown RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 KLC4Q9NSK0 619 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 WSB2Q9NYS7 404 aaPredicted RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 ZFP69BQ9UJL9 534 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 HAO1Q9UJM8 370 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SLC17A4Q9Y2C5 497 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 PCYT1BQ9Y5K3 369 aaPredicted RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 KLHL33A6NCF5 533 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 TRPC5OSA6NMA1 111 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 PRAMEF26H0Y7S4 382 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 H0Y8X5 98 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 IFRD1O00458 451 aaPredicted RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 E2F3O00716 465 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 PSIP1O75475 530 aaKnown RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SKAP2O75563 359 aaPredicted RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 STK16O75716 305 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 CEACAM5P06731 702 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 GDF5P43026 501 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 BDKRB1P46663 353 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 IDH3AP50213 366 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 CCR5P51681 352 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 KIAA1024LP59773 190 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SH3BP2P78314 561 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 CDKL1Q00532 357 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 GTF2H2Q13888 395 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 GTF2H2CQ6P1K8 395 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 TTC23LQ6PF05 361 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 C6orf89Q6UWU4 347 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 FAM83HQ6ZRV2 1179 aaPredicted RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 ACAD11Q709F0 780 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 CLYBLQ8N0X4 340 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 ERP27Q96DN0 273 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SPATA6Q9NWH7 488 aaPredicted RBP16.93■□□□□ 0.3
CLDN4-201ENST00000340958 GULP1Q9UBP9 304 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SLC23A2Q9UGH3 650 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 SUFUQ9UMX1 484 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 ASB1Q9Y576 335 aa16.93■□□□□ 0.3
CLDN4-201ENST00000340958 ARHGEF33A8MVX0 844 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 PPP6CO00743 305 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 TAPBPO15533 448 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 LATO43561 262 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 SLC35G4P0C7Q5 338 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 ALOX15P16050 662 aaPredicted RBP16.92■□□□□ 0.3
CLDN4-201ENST00000340958 RPA4Q13156 261 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 NFATC4Q14934 902 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 NXNQ6DKJ4 435 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 CLEC6AQ6EIG7 209 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 EPGNQ6UW88 154 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 RD3Q7Z3Z2 195 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 MAVSQ7Z434 540 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 GOLGA7Q7Z5G4 137 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 ALYREFQ86V81 257 aaKnown RBP16.92■□□□□ 0.3
CLDN4-201ENST00000340958 C1orf210Q8IVY1 113 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 FAM160A2Q8N612 972 aaPredicted RBP16.92■□□□□ 0.3
CLDN4-201ENST00000340958 FITM2Q8N6M3 262 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 GBP7Q8N8V2 638 aaPredicted RBP16.92■□□□□ 0.3
CLDN4-201ENST00000340958 SNX31Q8N9S9 440 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 ATL1Q8WXF7 558 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 BIRC7Q96CA5 298 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 CCDC138Q96M89 665 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 PRRX2Q99811 253 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 CARS2Q9HA77 564 aaKnown RBP16.92■□□□□ 0.3
CLDN4-201ENST00000340958 PSMD13Q9UNM6 376 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 ASF1AQ9Y294 204 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 STK38LQ9Y2H1 464 aa16.92■□□□□ 0.3
CLDN4-201ENST00000340958 GOLGA8QA0A0J9YX86 632 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 GOLGA8OA6NCC3 632 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 GOLGA8NF8WBI6 632 aa16.91■□□□□ 0.3
CLDN4-201ENST00000340958 K7EPI3 171 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms