RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 DYTNA2CJ06 578 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 ARNTLO00327 626 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SEC22BO75396 215 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 NPPAP01160 153 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 EBLN1P0CF75 366 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 HTR1EP28566 365 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 AKT1P31749 480 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 APOFQ13790 326 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 BOP1Q14137 746 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 PLPP4Q5VZY2 271 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 KRT80Q6KB66 452 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SERPINA13PQ6UXR4 307 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 UBE2R2Q712K3 238 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SCAMP4Q969E2 229 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 VAPAQ9P0L0 249 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 TRPS1Q9UHF7 1281 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 ANAPC2Q9UJX6 822 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 EIF3LQ9Y262 564 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 IGLV3-16A0A075B6K0 115 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 RNF103-CHMP3A0A140T963 221 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SMIM31A0A1B0GVY4 71 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 CARNS1A5YM72 827 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 DFNA5O60443 496 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 GNAO1P09471 354 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 OR56A5P0C7T3 313 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 TYRP14679 529 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 AOAHP28039 575 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 GNPDA1P46926 289 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 PWP1Q13610 501 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 AASDHQ4L235 1098 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 PYCR3Q53H96 274 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 INTS11Q5TA45 600 aaKnown RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 TMEM215Q68D42 235 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SUSD1Q6UWL2 747 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 DNAJC14Q6Y2X3 702 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 TRIM46Q7Z4K8 759 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 ADIPOR2Q86V24 386 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 DTWD1Q8N5C7 304 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 NAT16Q8N8M0 369 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 OR2A12Q8NGT7 310 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC13A3Q8WWT9 602 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 TFAP2CQ92754 450 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 PYCR2Q96C36 320 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 ZNF641Q96N77 438 aaPredicted RBP14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 ANKRD60Q9BZ19 345 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 ACTR8Q9H981 624 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 LRTM1Q9HBL6 345 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 SMOXQ9NWM0 555 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 HCFC2Q9Y5Z7 792 aa14.54□□□□□ -0.08
CLCNKA-201ENST00000331433 GRXCR2A6NFK2 248 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC28A1O00337 649 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 EFCAB14O75071 495 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 MOSPD3O75425 235 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CBSLP0DN79 551 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CBSP35520 551 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC5A9Q2M3M2 681 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 SPANXN4Q5MJ08 99 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 GLYATQ6IB77 296 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 GDPD4Q6W3E5 623 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 RBM44Q6ZP01 1051 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CYB5D2Q8WUJ1 264 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 IRF7Q92985 503 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 DPY30Q9C005 99 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 TRIM4Q9C037 500 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CEP44Q9C0F1 390 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CAAP1Q9H8G2 361 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 FAM8A1Q9UBU6 413 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 ACOX3O15254 700 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CLDN9O95484 217 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 RPL10P27635 214 aaKnown RBP14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 ATP6AP1Q15904 470 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 FXNQ16595 210 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 LY6G5CQ5SRR4 150 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 CHCHD4Q8N4Q1 142 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 FAM47BQ8NA70 645 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 USP7Q93009 1102 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 ZBTB18Q99592 522 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 ACPTQ9BZG2 426 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 MTG2Q9H4K7 406 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 SLC32A1Q9H598 525 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 TDP1Q9NUW8 608 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 OLAHQ9NV23 265 aa14.53□□□□□ -0.08
CLCNKA-201ENST00000331433 EI24O14681 340 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 WDR47O94967 919 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 KCNH1O95259 989 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 PDYNP01213 254 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 WEE1P30291 646 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 NEK2P51955 445 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 CACHD1Q5VU97 1274 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 HSD11B1LQ7Z5J1 315 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 PACRGLQ8N7B6 248 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 BEND7Q8N7W2 519 aaPredicted RBP14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 NCSTNQ92542 709 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 GTF2H4Q92759 462 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 NMD3Q96D46 503 aaKnown RBP14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 NSMCE2Q96MF7 247 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 RNF145Q96MT1 663 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 C9orf16Q9BUW7 83 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 EPB41L1Q9H4G0 881 aa14.52□□□□□ -0.08
CLCNKA-201ENST00000331433 IKZF5Q9H5V7 419 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms