RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 C17orf62Q9BQA9 187 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 DPH2Q9BQC3 489 aaPredicted RBP6.46□□□□□ -1.37
CSTF3-201ENST00000323959 AP1M1Q9BXS5 423 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 ROPN1BQ9BZX4 212 aaPredicted RBP6.46□□□□□ -1.37
CSTF3-201ENST00000323959 CHST8Q9H2A9 424 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 ROPN1Q9HAT0 212 aaPredicted RBP6.46□□□□□ -1.37
CSTF3-201ENST00000323959 PCDH18Q9HCL0 1135 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 FGF22Q9HCT0 170 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 SARS2Q9NP81 518 aaKnown RBP6.46□□□□□ -1.37
CSTF3-201ENST00000323959 SMARCAL1Q9NZC9 954 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 MTRF1LQ9UGC7 380 aaKnown RBP6.46□□□□□ -1.37
CSTF3-201ENST00000323959 RSPH14Q9UHP6 348 aa6.46□□□□□ -1.37
CSTF3-201ENST00000323959 NKX2-6A6NCS4 301 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 AGPSO00116 658 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 LEFTY1O75610 366 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 DOC2BQ14184 412 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 C5orf22Q49AR2 442 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 TMEM52BQ4KMG9 183 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ICE2Q659A1 982 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 NADSYN1Q6IA69 706 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 CPNE8Q86YQ8 564 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 LRRC49Q8IUZ0 686 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 DEPDC4Q8N2C3 294 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 HEPHQ9BQS7 1158 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 EIF2B3Q9NR50 452 aaKnown RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ABCC13Q9NSE7 274 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 GOLGA6L7A0A1B0GV03 622 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 TCRBV7S2A1N4TA0A589 114 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 A8MV72 311 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 DNALI1O14645 258 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 RASAL1O95294 804 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ZBED1O96006 694 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 GSTA2P09210 222 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 RPL21P46778 160 aaKnown RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 DPYSQ14117 519 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ANKRD20A8PQ5CZ79 823 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 MANEALQ5VSG8 457 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 FAM199XQ6PEV8 388 aaPredicted RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 FAM198BQ6UWH4 519 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ISLR2Q6UXK2 745 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 CYS1Q717R9 158 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 TDRPQ86YL5 185 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 PLPP6Q8IY26 295 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 GOLGA6L1Q8N7Z2 621 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 CHST14Q8NCH0 376 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 FAM172AQ8WUF8 416 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 ALG14Q96F25 216 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 PSMB7Q99436 277 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 FMO2Q99518 471 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 CWC15Q9P013 229 aaKnown RBP6.46□□□□□ -1.38
CSTF3-201ENST00000323959 SEMA5BQ9P283 1151 aa6.46□□□□□ -1.38
CSTF3-201ENST00000323959 C5orf60A6NFR6 353 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 SYF2O95926 243 aaKnown RBP6.45□□□□□ -1.38
CSTF3-201ENST00000323959 CDK16Q00536 496 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 WSCD2Q2TBF2 565 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 FLYWCH1Q4VC44 716 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PRAMEF13Q5VWM6 474 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 AFMIDQ63HM1 303 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PWWP2BQ6NUJ5 590 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 C22orf39Q6P5X5 142 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 KLHL7Q8IXQ5 586 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 DSELQ8IZU8 1212 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 RIBC1Q8N443 379 aaPredicted RBP6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PQLC3Q8N755 202 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PLD5Q8N7P1 536 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 SPOCK2Q92563 424 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 HAUS1Q96CS2 278 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 TTC25Q96NG3 672 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PPP1R2P1Q96PQ5 205 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 QKIQ96PU8 341 aaKnown RBP eCLIP6.45□□□□□ -1.381e-9■■■■■ 32.4
CSTF3-201ENST00000323959 SNRNP25Q9BV90 132 aaKnown RBP6.45□□□□□ -1.38
CSTF3-201ENST00000323959 EPB41L4BQ9H329 900 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 LRRC4Q9HBW1 653 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PPARGC1AQ9UBK2 798 aaKnown RBP6.45□□□□□ -1.38
CSTF3-201ENST00000323959 NFU1Q9UMS0 254 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PRRG2O14669 202 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 JCHAINP01591 159 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 SLC2A4P14672 509 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 TCF4P15884 667 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 MX2P20592 715 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 OTX2P32243 289 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 ADIGQ0VDE8 80 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 NCF4Q15080 339 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 SLC14A2Q15849 920 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 RNASEH2BQ5TBB1 312 aaKnown RBP6.45□□□□□ -1.38
CSTF3-201ENST00000323959 ABHD17BQ5VST6 288 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 TXNRD3NBQ6F5E7 133 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 AADACL2Q6P093 401 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 FGD2Q7Z6J4 655 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 CDKL3Q8IVW4 592 aaPredicted RBP6.45□□□□□ -1.38
CSTF3-201ENST00000323959 SIX6OS1Q8N1H7 587 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 KCTD6Q8NC69 237 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 LRRC39Q96DD0 335 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 PGM2Q96G03 612 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 SLC39A13Q96H72 371 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 ELMO2Q96JJ3 720 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 AGAP2Q99490 1192 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
CSTF3-201ENST00000323959 FAM49BQ9NUQ9 324 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms