RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MOXD2PA6NHM9 499 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 TTC34A8MYJ7 566 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RAMP2O60895 175 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 HOXB8P17481 243 aaPredicted RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 HSPA7P48741 367 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RPL34P49207 117 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 TP53BP2Q13625 1128 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 SEMA3AQ14563 771 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RAP1GAP2Q684P5 730 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 SPATA2LQ8IUW3 424 aaPredicted RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 LIX1Q8N485 282 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 ASCC1Q8N9N2 400 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RHEBL1Q8TAI7 183 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 FUBP1Q96AE4 644 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 TMEM246Q9BRR3 403 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 BEX2Q9BXY8 128 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 MMP27Q9H306 513 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 IPPKQ9H8X2 491 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 REEP1Q9H902 201 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 LATS2Q9NRM7 1088 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 ERVK13-1Q9NX77 482 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 ABI2Q9NYB9 513 aaPredicted RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 WWOXQ9NZC7 414 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 UGT2A1Q9Y4X1 527 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 PMF1-BGLAPU3KQ54 211 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 PNMA8CA0A1B0GUJ8 204 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 MEIS3P2A8K0S8 358 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 M0QX08 132 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 PER2O15055 1255 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 THP07101 528 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 CTSHP09668 335 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 GADD45AP24522 165 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 AQP1P29972 269 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 OR1E1P30953 314 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 S100A3P33764 101 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 HUNKP57058 714 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 ERVPABLB-1P60509 514 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 DALRD3Q5D0E6 543 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 LETMD1Q6P1Q0 360 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 KDELC1Q6UW63 502 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 DLEU7Q6UYE1 221 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 USP43Q70EL4 1123 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 CYP4Z1Q86W10 505 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 NETO1Q8TDF5 533 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 IMP4Q96G21 291 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 CDKN2AIPNLQ96HQ2 116 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 DHRS1Q96LJ7 313 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 Q96MT0 163 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 POLR1EQ9GZS1 481 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 HOXD1Q9GZZ0 328 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 SP140LQ9H930 580 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RPRD1BQ9NQG5 326 aaKnown RBP11.2□□□□□ -0.62
TRUB1-201ENST00000298746 IMPAD1Q9NX62 359 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 IKZF3Q9UKT9 509 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 RNF6Q9Y252 685 aa11.2□□□□□ -0.62
TRUB1-201ENST00000298746 A0A096LPI6 279 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ISPDA4D126 451 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 TRIM64BA6NI03 449 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 C21orf33P30042 268 aaPredicted RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 CTSKP43235 329 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 RACK1P63244 317 aaKnown RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ZNF33AQ06730 810 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 SOWAHCQ53LP3 525 aaPredicted RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 Q6ZSR9 355 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 GALNT12Q8IXK2 581 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 METTL4Q8N3J2 472 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ARRDC4Q8NCT1 418 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 OR4F6Q8NGB9 312 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ITPAQ9BY32 194 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ACOT13Q9NPJ3 140 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 FBXO8Q9NRD0 319 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ABCC13Q9NSE7 274 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PCTPQ9UKL6 214 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ANK1P16157 1881 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 LY75O60449 1722 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 C2orf81A6NN90 581 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 TBKBP1A7MCY6 615 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 KCNK2O95069 426 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 CPSF4O95639 269 aaKnown RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 POMCP01189 267 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PGRP06401 933 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 RPS12P25398 132 aaKnown RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 GDF5P43026 501 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 BRCC3P46736 316 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 STC1P52823 247 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 GRIK2Q13002 908 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 ABRAXAS2Q15018 415 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 MED22Q15528 200 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 CPSF6Q16630 551 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PTRHD1Q6GMV3 140 aaKnown RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.19□□□□□ -0.62
TRUB1-201ENST00000298746 LPCAT1Q8NF37 534 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 TXNDC15Q96J42 360 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 PPP3R2Q96LZ3 170 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 IKZF5Q9H5V7 419 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
TRUB1-201ENST00000298746 TRPV5Q9NQA5 729 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms