RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TMEM207Q6UWW9 146 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CERS6Q6ZMG9 384 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CHST15Q7LFX5 561 aaPredicted RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 ERMP1Q7Z2K6 904 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PIP4P1Q86T03 277 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PIM3Q86V86 326 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ZC3HC1Q86WB0 502 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 C17orf82Q86X59 251 aaPredicted RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 GALNT13Q8IUC8 556 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 TRAPPC5Q8IUR0 188 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PALM2Q8IXS6 379 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 KIAA2013Q8IYS2 634 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 NAGSQ8N159 534 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 KYQ8NBH2 561 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 UHMK1Q8TAS1 419 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 LMX1AQ8TE12 382 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 UBXN4Q92575 508 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.78□□□□□ -1.48
SSX3-201ENST00000298396 FAM136AQ96C01 138 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 RMDN2Q96LZ7 410 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 CAMK1GQ96NX5 476 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 NDNQ99608 321 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 NRTNQ99748 197 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 OLFM1Q99784 485 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 TIMM29Q9BSF4 260 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 FAM167BQ9BTA0 163 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 AARSD1Q9BTE6 412 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 SLC13A1Q9BZW2 595 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MRPL18Q9H0U6 180 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 ACSS3Q9H6R3 686 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 RMI1Q9H9A7 625 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 VPS37BQ9H9H4 285 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 TMEM9BQ9NQ34 198 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 PRDM8Q9NQV8 689 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 KLC4Q9NSK0 619 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 INTS10Q9NVR2 710 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 TRNAU1APQ9NX07 287 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 TAAR2Q9P1P5 351 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 TBC1D29Q9UFV1 150 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 ZNHIT2Q9UHR6 403 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MOSPD1Q9UJG1 213 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 GPR34Q9UPC5 381 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 WDR37Q9Y2I8 494 aa5.78□□□□□ -1.48
SSX3-201ENST00000298396 MTO1Q9Y2Z2 717 aaKnown RBP5.78□□□□□ -1.48
SSX3-201ENST00000298396 SCN2AQ99250 2005 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 UBA6A0AVT1 1052 aaPredicted RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 SLC5A10A0PJK1 596 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 MGAT4DA6NG13 374 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 C9orf172C9J069 976 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SIGLEC6O43699 453 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SH3BP5O60239 455 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 DFNA5O60443 496 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 GPC4O75487 556 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 NDUFS3O75489 264 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 WISP1O95388 367 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 TSPAN12O95859 305 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 ESR1P03372 595 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 PKMP14618 531 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 NME2P22392 152 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 FDXRP22570 491 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 RPL10P27635 214 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 PMLP29590 882 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 STX2P32856 288 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 HSD17B3P37058 310 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 ACTR1BP42025 376 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CD151P48509 253 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 ARRB1P49407 418 aaPredicted RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 LIMK1P53667 647 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 MAZP56270 477 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 ACTR1AP61163 376 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 HNRNPKP61978 463 aaKnown RBP eCLIP5.77□□□□□ -1.49
SSX3-201ENST00000298396 RPS26P62854 115 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 GTF2H3Q13889 308 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SLC29A2Q14542 456 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 ZNF460Q14592 562 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SLMAPQ14BN4 828 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CLCA4Q14CN2 919 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 INSCQ1MX18 579 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 UAP1L1Q3KQV9 507 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 AARS2Q5JTZ9 985 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 METRNLQ641Q3 311 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 DUS1LQ6P1R4 473 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 OGFOD3Q6PK18 319 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 KIAA0408Q6ZU52 694 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 TRMT10CQ7L0Y3 403 aaKnown RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 STRA8Q7Z7C7 330 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 TAF8Q7Z7C8 310 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SLC26A11Q86WA9 606 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 RASGRP3Q8IV61 690 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 CEP97Q8IW35 865 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 LMNTD2Q8IXW0 634 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 SLC35F3Q8IY50 421 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 FSTL5Q8N475 847 aaPredicted RBP5.77□□□□□ -1.49
SSX3-201ENST00000298396 EID2Q8N6I1 236 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 OTUD6BQ8N6M0 293 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 PPM1NQ8N819 430 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 GPR156Q8NFN8 814 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 MYRIPQ8NFW9 859 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 OR2L2Q8NH16 312 aa5.77□□□□□ -1.49
SSX3-201ENST00000298396 OR4C6Q8NH72 309 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms