RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 PAPD5Q8NDF8 572 aaKnown RBP19.56■□□□□ 0.72
CXCL16-201ENST00000293778 SKA2Q8WVK7 121 aaPredicted RBP19.56■□□□□ 0.72
CXCL16-201ENST00000293778 SLC13A3Q8WWT9 602 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 PAWRQ96IZ0 340 aaKnown RBP19.56■□□□□ 0.72
CXCL16-201ENST00000293778 C9orf16Q9BUW7 83 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 SLC32A1Q9H598 525 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 RPF2Q9H7B2 306 aaKnown RBP19.56■□□□□ 0.72
CXCL16-201ENST00000293778 ACTR8Q9H981 624 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 ZFP14Q9HCL3 533 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 PKD2L2Q9NZM6 624 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 MBD1Q9UIS9 605 aaPredicted RBP19.56■□□□□ 0.72
CXCL16-201ENST00000293778 PCDHB3Q9Y5E6 796 aa19.56■□□□□ 0.72
CXCL16-201ENST00000293778 HIDE1A8MVS5 230 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 SEC22BO75396 215 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 TYRP14679 529 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 DDX6P26196 483 aaKnown RBP eCLIP19.55■□□□□ 0.72
CXCL16-201ENST00000293778 AKT1P31749 480 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 PLIN5Q00G26 463 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 SELPLGQ14242 412 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 THEMIS2Q5TEJ8 643 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 KRT80Q6KB66 452 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 TTC23LQ6PF05 361 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 HOMEZQ8IX15 550 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 TBC1D21Q8IYX1 336 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 LIX1Q8N485 282 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 MFSD2AQ8NA29 543 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 SPDYE1Q8NFV5 336 aaPredicted RBP19.55■□□□□ 0.72
CXCL16-201ENST00000293778 OR2A12Q8NGT7 310 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 USP7Q93009 1102 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 BIRC7Q96CA5 298 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 ANKRD60Q9BZ19 345 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 DPY30Q9C005 99 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 C11orf49Q9H6J7 331 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 TDP1Q9NUW8 608 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 ZNHIT2Q9UHR6 403 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 MAGEL2Q9UJ55 1249 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 PADI4Q9UM07 663 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 MYOFQ9NZM1 2061 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 PDLIM1O00151 329 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 KIAA0355O15063 1070 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 OR6B1O95007 311 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 KCNH1O95259 989 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 KRT6AP02538 564 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 KRT6BP04259 564 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 C8GP07360 202 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 GGT5P36269 586 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 RECQLP46063 649 aaPredicted RBP19.55■□□□□ 0.72
CXCL16-201ENST00000293778 KRT6CP48668 564 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 ATP6AP1Q15904 470 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 PLA2G4EQ3MJ16 856 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 ELMSAN1Q6PJG2 1045 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 ADIPOR2Q86V24 386 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 GALNT13Q8IUC8 556 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 SLC12A9Q9BXP2 914 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 LINC00597Q9H2U6 94 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 PARVBQ9HBI1 364 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 SPHK2Q9NRA0 654 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 ASIC5Q9NY37 505 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 OAZ3Q9UMX2 235 aa19.55■□□□□ 0.72
CXCL16-201ENST00000293778 WASH3PC4AMC7 463 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 NUAK1O60285 661 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 MOSPD3O75425 235 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 RFPL2O75678 378 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 FGF19O95750 216 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 ATP1B2P14415 290 aaPredicted RBP19.54■□□□□ 0.72
CXCL16-201ENST00000293778 EPORP19235 508 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 EPHA5P54756 1037 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 HTRA4P83105 476 aaPredicted RBP19.54■□□□□ 0.72
CXCL16-201ENST00000293778 GBX1Q14549 363 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 DMC1Q14565 340 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 CPSF6Q16630 551 aaKnown RBP eCLIP19.54■□□□□ 0.72
CXCL16-201ENST00000293778 FAM174BQ3ZCQ3 159 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 ARHGAP15Q53QZ3 475 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 PLPP4Q5VZY2 271 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 GLYATQ6IB77 296 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 TCAIMQ8N3R3 496 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 GLB1L3Q8NCI6 653 aaPredicted RBP19.54■□□□□ 0.72
CXCL16-201ENST00000293778 OR8J3Q8NGG0 315 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 MYLIPQ8WY64 445 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 NCSTNQ92542 709 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 TFAP2CQ92754 450 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 CLP1Q92989 425 aaKnown RBP19.54■□□□□ 0.72
CXCL16-201ENST00000293778 NSMCE2Q96MF7 247 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 GRIP2Q9C0E4 1043 aa19.54■□□□□ 0.72
CXCL16-201ENST00000293778 RNF103-CHMP3A0A140T963 221 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 HIST1H2AGP0C0S8 130 aaPredicted RBP19.53■□□□□ 0.72
CXCL16-201ENST00000293778 HIST1H2ADP20671 130 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 BOP1Q14137 746 aaKnown RBP19.53■□□□□ 0.72
CXCL16-201ENST00000293778 NADK2Q4G0N4 442 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 TMTC4Q5T4D3 741 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 BRAT1Q6PJG6 821 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 LRRC70Q7Z2Q7 622 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 METTL25Q8N6Q8 603 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 ZNF557Q8N988 423 aaPredicted RBP19.53■□□□□ 0.72
CXCL16-201ENST00000293778 ASB11Q8WXH4 323 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 MTFMTQ96DP5 389 aaKnown RBP19.53■□□□□ 0.72
CXCL16-201ENST00000293778 HIST1H2AHQ96KK5 128 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 SEPHS2Q99611 448 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 HIST1H2AJQ99878 128 aa19.53■□□□□ 0.72
CXCL16-201ENST00000293778 H2AFJQ9BTM1 129 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms