RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 BTBD1Q9H0C5 482 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 MIR1-1HGQ9H1L0 117 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 IRAK4Q9NWZ3 460 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 KCNK6Q9Y257 313 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 RNF11Q9Y3C5 154 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 OARD1Q9Y530 152 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 V9GYQ6 96 aa9.12□□□□□ -0.95
SSR3-201ENST00000265044 ANTXRLA6NF34 631 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 GFRA2O00451 464 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 LATO43561 262 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 NRP2O60462 931 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 LRATO95237 230 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 HNF4AP41235 474 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 GNPDA1P46926 289 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 ADARP55265 1226 aaKnown RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 MAD2L1Q13257 205 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 TRMT5Q32P41 509 aaKnown RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 HPS6Q86YV9 775 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 ETFBKMTQ8IXQ9 262 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 NRSN1Q8IZ57 195 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 TFGQ92734 400 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 RAD51AP1Q96B01 352 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 ECSITQ9BQ95 431 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 P2RY12Q9H244 342 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 DCLRE1BQ9H816 532 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 CARS2Q9HA77 564 aaKnown RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 PCTPQ9UKL6 214 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 PDE10AQ9Y233 779 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 CABIN1Q9Y6J0 2220 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 NYNRINQ9P2P1 1898 aaKnown RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 CCDC189A1A4V9 331 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 KRT87PA6NCN2 255 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 SLC22A3O75751 556 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 T-ENOLP0DO92 83 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 MTHFD2P13995 350 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 AOC1P19801 751 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 IDSP22304 550 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RPS21P63220 83 aaKnown RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 PHEXP78562 749 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 CAPRIN1Q14444 709 aaKnown RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 NFE2L1Q14494 772 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 TAF11Q15544 211 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 TMEM31Q5JXX7 168 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 ARTNQ5T4W7 220 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 AGTRAPQ6RW13 159 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 SUSD1Q6UWL2 747 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 ENPP7Q6UWV6 458 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 CYP2R1Q6VVX0 501 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RASGEF1AQ8N9B8 481 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 OR2T3Q8NH03 318 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RPLP0P6Q8NHW5 317 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 AGAP11Q8TF27 550 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 SLC7A6OSQ96CW6 309 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 C12orf66Q96MD2 445 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RTKNQ9BST9 563 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 MMADHCQ9H3L0 296 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 DENND2DQ9H6A0 471 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 SGK2Q9HBY8 427 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 SH3BP4Q9P0V3 963 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 MYO10Q9HD67 2058 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 FADS2P1A8MWK0 482 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 K7ESM1 405 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 MAP3K7O43318 606 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 TBX10O75333 385 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RASGRP1O95267 797 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 CTSEP14091 401 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 ME2P23368 584 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RAP1GDS1P52306 607 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 DIO3P55073 304 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 PSME3P61289 254 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 NFKB2Q00653 900 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 PLOD1Q02809 727 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 EOGTQ5NDL2 527 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 LILRA3Q8N6C8 439 aaPredicted RBP9.11□□□□□ -0.95
SSR3-201ENST00000265044 SPDL1Q96EA4 605 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 CCDC106Q9BWC9 280 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 VCXQ9H320 206 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 LRTM1Q9HBL6 345 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 NMRK1Q9NWW6 199 aa9.11□□□□□ -0.95
SSR3-201ENST00000265044 PSMD11O00231 422 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 SLC28A1O00337 649 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 TPST1O60507 370 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 RNGTTO60942 597 aaKnown RBP9.1□□□□□ -0.95
SSR3-201ENST00000265044 GNAZP19086 355 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 MAPK1P28482 360 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 PDHA2P29803 388 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 GGT5P36269 586 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 HNMTP50135 292 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 FCHO2Q0JRZ9 810 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 MAP7Q14244 749 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 GRB7Q14451 532 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 TMTC4Q5T4D3 741 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 MAVSQ7Z434 540 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 SYT12Q8IV01 421 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 HID1Q8IV36 788 aa9.1□□□□□ -0.95
SSR3-201ENST00000265044 ACTRT2Q8TDY3 377 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms