RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CAAP1Q9H8G2 361 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 CCM2LQ9NUG4 571 aaPredicted RBP15.44■□□□□ 0.06
LRFN1-201ENST00000248668 ACTR3BQ9P1U1 418 aa15.44■□□□□ 0.06
LRFN1-201ENST00000248668 BOLA2-SMG1P6H3BVE0 249 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 ULK1O75385 1050 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 B3GALT4O96024 378 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 PABPC1P11940 636 aaKnown RBP15.43■□□□□ 0.06
LRFN1-201ENST00000248668 PCNAP12004 261 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 NSG1P42857 185 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 FAM174BQ3ZCQ3 159 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 CARD16Q5EG05 197 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 MACC1Q6ZN28 852 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 CCDC149Q6ZUS6 474 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 UBE2R2Q712K3 238 aaPredicted RBP15.43■□□□□ 0.06
LRFN1-201ENST00000248668 ADGRG5Q8IZF4 528 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 LIX1Q8N485 282 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 TRIM15Q9C019 465 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 RPF2Q9H7B2 306 aaKnown RBP15.43■□□□□ 0.06
LRFN1-201ENST00000248668 ZIM2Q9NZV7 527 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 TMPRSS11EQ9UL52 423 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 OAZ3Q9UMX2 235 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 TTC34A8MYJ7 566 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 UPK3BL1B0FP48 263 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 UPK3BL2E5RIL1 263 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 DFNA5O60443 496 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 SH3BGRLO75368 114 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 STK16O75716 305 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 GNAO1P09471 354 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 EPB42P16452 691 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 HPCAP84074 193 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 TMEM215Q68D42 235 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 Q6ZVL8 140 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 EPHX4Q8IUS5 362 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 TMEM126BQ8IUX1 230 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 RGL4Q8IZJ4 473 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 GFM2Q969S9 779 aaKnown RBP15.43■□□□□ 0.06
LRFN1-201ENST00000248668 TBCDQ9BTW9 1192 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 SOX17Q9H6I2 414 aaPredicted RBP15.43■□□□□ 0.06
LRFN1-201ENST00000248668 ZDHHC3Q9NYG2 299 aa15.43■□□□□ 0.06
LRFN1-201ENST00000248668 K7EPI3 171 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 GJA8P48165 433 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 TTLL9Q3SXZ7 439 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 MPP7Q5T2T1 576 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 KRT80Q6KB66 452 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 ZSWIM3Q96MP5 696 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 PDE10AQ9Y233 779 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 EMX2Q04743 252 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 SFSWAPQ12872 951 aaKnown RBP15.42■□□□□ 0.06
LRFN1-201ENST00000248668 BNIP2Q12982 314 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 ZXDCQ2QGD7 858 aaPredicted RBP15.42■□□□□ 0.06
LRFN1-201ENST00000248668 GPR33Q49SQ1 333 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 GTDC1Q4AE62 458 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 SPANXN4Q5MJ08 99 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 RNF145Q96MT1 663 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 HS3ST2Q9Y278 367 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 GRM6O15303 877 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 FASP25445 335 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 NFKBIAP25963 317 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 ETV3P41162 512 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 SULT1C3Q6IMI6 304 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 LCN8Q6JVE9 175 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 METTL25Q8N6Q8 603 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 KCTD5Q9NXV2 234 aa15.42■□□□□ 0.06
LRFN1-201ENST00000248668 A0A1W2PQ67 120 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 KANSL1LA0AUZ9 987 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 LRATO95237 230 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 POP4O95707 220 aaKnown RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 TFAP2AP05549 437 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ANXA5P08758 320 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 RECQLP46063 649 aaPredicted RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ARSIQ5FYB1 569 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 SUSD1Q6UWL2 747 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 NANOGNBQ7Z5D8 188 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 HSD11B1LQ7Z5J1 315 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ANKRD46Q86W74 232 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 OR2A12Q8NGT7 310 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ZUFSPQ96AP4 578 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 VPS50Q96JG6 964 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 LMLNQ96KR4 655 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ZNF597Q96LX8 424 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 THUMPD3Q9BV44 507 aaKnown RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 HEBP1Q9NRV9 189 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 TDP1Q9NUW8 608 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 VAPAQ9P0L0 249 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 PER2O15055 1255 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 LEFTY1O75610 366 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 WDR47O94967 919 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 TNFAIP8O95379 198 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 RHOP08100 348 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 HRH2P25021 359 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 SPINT3P49223 89 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 PYCR3Q53H96 274 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 DLEU7Q6UYE1 221 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 FAM47BQ8NA70 645 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 AURKBQ96GD4 344 aaPredicted RBP15.41■□□□□ 0.06
LRFN1-201ENST00000248668 ST14Q9Y5Y6 855 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 TMEM202A6NGA9 273 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 AQP12BA6NM10 295 aa15.41■□□□□ 0.06
LRFN1-201ENST00000248668 GSNP06396 782 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms