RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 ASF1AQ9Y294 204 aa18.74■□□□□ 0.59
SBDS-201ENST00000246868 PRR19A6NJB7 356 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 GUCA1CO95843 209 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 CSF2P04141 144 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 ANXA5P08758 320 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 MTHFD2P13995 350 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 NME1P15531 152 aaKnown RBP18.73■□□□□ 0.59
SBDS-201ENST00000246868 AK4P27144 223 aaPredicted RBP18.73■□□□□ 0.59
SBDS-201ENST00000246868 ALDH18A1P54886 795 aaKnown RBP18.73■□□□□ 0.59
SBDS-201ENST00000246868 CDKL1Q00532 357 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 TCEA2Q15560 299 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 UAP1L1Q3KQV9 507 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 CFAP157Q5JU67 520 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 PRR23BQ6ZRT6 265 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 RABEPKQ7Z6M1 372 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 SYT12Q8IV01 421 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 SPDYE1Q8NFV5 336 aaPredicted RBP18.73■□□□□ 0.59
SBDS-201ENST00000246868 GPBAR1Q8TDU6 330 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 PIGKQ92643 395 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 ZNF75CPQ92670 426 aaPredicted RBP18.73■□□□□ 0.59
SBDS-201ENST00000246868 PILRBQ9UKJ0 227 aa18.73■□□□□ 0.59
SBDS-201ENST00000246868 ARHGEF33A8MVX0 844 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 SERPINE1P05121 402 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 FGF3P11487 239 aaPredicted RBP18.72■□□□□ 0.59
SBDS-201ENST00000246868 LSP1P33241 339 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 HOXD12P35452 270 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 HNRNPKP61978 463 aaKnown RBP eCLIP18.72■□□□□ 0.59
SBDS-201ENST00000246868 SULT1C3Q6IMI6 304 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 WASH2PQ6VEQ5 465 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 RGS9BPQ6ZS82 235 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 TAF8Q7Z7C8 310 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 RASGRP3Q8IV61 690 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 TCAIMQ8N3R3 496 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 PDPRQ8NCN5 879 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 FBXO15Q8NCQ5 510 aaPredicted RBP18.72■□□□□ 0.59
SBDS-201ENST00000246868 RMDN2Q96LZ7 410 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 C12orf66Q96MD2 445 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 ZDHHC5Q9C0B5 715 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 TCEAL2Q9H3H9 227 aaPredicted RBP18.72■□□□□ 0.59
SBDS-201ENST00000246868 C11orf16Q9NQ32 467 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 WASH6PQ9NQA3 447 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 KLF15Q9UIH9 416 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 HEBP2Q9Y5Z4 205 aa18.72■□□□□ 0.59
SBDS-201ENST00000246868 TNRC6BQ9UPQ9 1833 aaKnown RBP18.72■□□□□ 0.59
SBDS-201ENST00000246868 TDRD6O60522 2096 aaKnown RBP18.72■□□□□ 0.59
SBDS-201ENST00000246868 STX16-NPEPL1H3BU86 382 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 STX16O14662 325 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 KLF11O14901 512 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 KLK8O60259 260 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 C1orf105O95561 183 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 HNMTP50135 292 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 NAGLUP54802 743 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 HERVK_113P63132 956 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 STX3Q13277 289 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 KRT33BQ14525 404 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 ELOCQ15369 112 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 PRRT3Q5FWE3 981 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 CAPRIN2Q6IMN6 1127 aaKnown RBP18.71■□□□□ 0.59
SBDS-201ENST00000246868 ZCCHC23Q6ZST2 131 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 CCNYL1Q8N7R7 359 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 CCL4L1Q8NHW4 92 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 ATL1Q8WXF7 558 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 CCDC138Q96M89 665 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 ERVK-6Q9BXR3 956 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 COL25A1Q9BXS0 654 aaPredicted RBP18.71■□□□□ 0.59
SBDS-201ENST00000246868 TRIT1Q9H3H1 467 aaKnown RBP18.71■□□□□ 0.59
SBDS-201ENST00000246868 PRDM8Q9NQV8 689 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 WWOXQ9NZC7 414 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 SPASTQ9UBP0 616 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 TBC1D29Q9UFV1 150 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 PCOLCE2Q9UKZ9 415 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 WDR37Q9Y2I8 494 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 TNPO3Q9Y5L0 923 aaKnown RBP18.71■□□□□ 0.59
SBDS-201ENST00000246868 ST14Q9Y5Y6 855 aa18.71■□□□□ 0.59
SBDS-201ENST00000246868 A0A1B0GVT2 93 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 TCP11X1B4DZS4 312 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 IMPDH1P20839 514 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 BDKRB1P46663 353 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 NAA20P61599 178 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 ABRAXAS1Q6UWZ7 409 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 DCUN1D3Q8IWE4 304 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 L3HYPDHQ96EM0 354 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 ERVMER34-1Q9H9K5 563 aa18.71■□□□□ 0.58
SBDS-201ENST00000246868 IMP3Q9NV31 184 aaKnown RBP18.71■□□□□ 0.58
SBDS-201ENST00000246868 CFAP20Q9Y6A4 193 aaKnown RBP18.71■□□□□ 0.58
SBDS-201ENST00000246868 CACNA1EQ15878 2313 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 PI4KAP42356 2102 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 FANCMQ8IYD8 2048 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 VIMP08670 466 aaKnown RBP18.7■□□□□ 0.58
SBDS-201ENST00000246868 SLC2A4P14672 509 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 CBX1P83916 185 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 SETDB1Q15047 1291 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.7■□□□□ 0.58
SBDS-201ENST00000246868 ZC3H14Q6PJT7 736 aaKnown RBP18.7■□□□□ 0.58
SBDS-201ENST00000246868 NRROSQ86YC3 692 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 TBC1D21Q8IYX1 336 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 OR5K2Q8NHB8 316 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 CEP76Q8TAP6 659 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 PPP4R1Q8TF05 950 aa18.7■□□□□ 0.58
SBDS-201ENST00000246868 RAD51AP1Q96B01 352 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms