RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 TNFP01375 233 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 CEACAM5P06731 702 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 F7P08709 466 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 CTSEP14091 401 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ZNF28P17035 718 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UGT1A6P19224 532 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UGT1A1P22309 533 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UGT1A4P22310 534 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ADRA1DP25100 572 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 AK4P27144 223 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 GRNP28799 593 aaKnown RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ECHS1P30084 290 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MC4RP32245 332 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 GPR3P46089 330 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 GPR1P46091 355 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 POLD2P49005 469 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 NPY2RP49146 381 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 CDKN1CP49918 316 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MC2RQ01718 297 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 DHX9Q08211 1270 aaKnown RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 NFATC2Q13469 925 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MAP7Q14244 749 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 SEMA3AQ14563 771 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 HIF1AQ16665 826 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 BBS9Q3SYG4 887 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ATP13A5Q4VNC0 1218 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 PCID2Q5JVF3 399 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 HP1BP3Q5SSJ5 553 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 FHL5Q5TD97 284 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MAMDC2Q7Z304 686 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 PCGF5Q86SE9 256 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ATCAYQ86WG3 371 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 RAVER1Q8IY67 606 aaKnown RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 PIANPQ8IYJ0 282 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 NLGN4XQ8N0W4 816 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 AGBL5Q8NDL9 886 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 NLGN4YQ8NFZ3 816 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 FBXO25Q8TCJ0 367 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 GLYATL1Q969I3 302 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ZNF669Q96BR6 464 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MFSD3Q96ES6 412 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 SCARF2Q96GP6 870 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 SIGLEC10Q96LC7 697 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 ZSCAN5AQ9BUG6 496 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 KIFC1Q9BW19 673 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UGT1A7Q9HAW7 530 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UGT1A10Q9HAW8 530 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UGT1A8Q9HAW9 530 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MRM3Q9HC36 420 aaKnown RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 RAD18Q9NS91 495 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 SMOXQ9NWM0 555 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 IL1RAPL1Q9NZN1 696 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 BFARQ9NZS9 450 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 TAAR2Q9P1P5 351 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 MARCH4Q9P2E8 410 aaPredicted RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 SRPK3Q9UPE1 567 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 DOLKQ9UPQ8 538 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 CHMP2BQ9UQN3 213 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 TMEM98Q9Y2Y6 226 aa7.26□□□□□ -1.25
PHGDH-225ENST00000641720 UTP11Q9Y3A2 253 aaKnown RBP7.26□□□□□ -1.25
PHGDH-225ENST00000641720 TRBV5-4A0A0C4DH59 114 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 ZCWPW2A0A1B0GU75 182 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 A6NCN8 305 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 SDR42E2A6NKP2 422 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 E7ESA3 106 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 H7C0S8 307 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 AP3B1O00203 1094 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 CACNB4O00305 520 aaPredicted RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 DNAJB5O75953 348 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 SRP72O76094 671 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 GOT2P00505 430 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 RHOXF2BP0C7M4 288 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 PGAM1P18669 254 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 MPSTP25325 297 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 MAP4P27816 1152 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 FOXN2P32314 431 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 ELK3P41970 407 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 FASLGP48023 281 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 ARCN1P48444 511 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 PMS2P54278 862 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 PLTPP55058 493 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 ARL4CP56559 192 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 SARNPP82979 210 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 PDE1BQ01064 536 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 CALCOCO2Q13137 446 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 MRPL49Q13405 166 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 CRYMQ14894 314 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 DBN1Q16643 649 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 AMZ1Q400G9 498 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 NADK2Q4G0N4 442 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 DNAJC21Q5F1R6 531 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 TEX35Q5T0J7 233 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 UBAP2Q5T6F2 1119 aaKnown RBP7.25□□□□□ -1.25
PHGDH-225ENST00000641720 GPRC6AQ5T6X5 926 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 ZDHHC20Q5W0Z9 365 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 PDPK2PQ6A1A2 396 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 CASC4Q6P4E1 433 aa7.25□□□□□ -1.25
PHGDH-225ENST00000641720 TMEM71Q6P5X7 295 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms