RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RPL38P63173 70 aaKnown RBP16.73■□□□□ 0.27
PHGDH-211ENST00000641213 ZDHHC20Q5W0Z9 365 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 PPP4R4Q6NUP7 873 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 ZBTB49Q6ZSB9 765 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 ADIPOR2Q86V24 386 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 CHERPQ8IWX8 916 aaKnown RBP16.73■□□□□ 0.27
PHGDH-211ENST00000641213 ULK4Q96C45 1275 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 OSBPL11Q9BXB4 747 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 LINC00597Q9H2U6 94 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 AGPAT4Q9NRZ5 378 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 CD84Q9UIB8 345 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
PHGDH-211ENST00000641213 SLC28A1O00337 649 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 SOCS2O14508 198 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 ULK1O75385 1050 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 WDR47O94967 919 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 TNFAIP8O95379 198 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 ANXA5P08758 320 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 FAM58BPP0C7Q3 252 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 OR56A5P0C7T3 313 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 TYRP14679 529 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 DDX6P26196 483 aaKnown RBP eCLIP16.72■□□□□ 0.27
PHGDH-211ENST00000641213 AOAHP28039 575 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 RPIAP49247 311 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 CLCN2P51788 898 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 DGKQP52824 942 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 PLPP4Q5VZY2 271 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 GDPD4Q6W3E5 623 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 OR2A12Q8NGT7 310 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 MYLIPQ8WY64 445 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 ZNF696Q9H7X3 374 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 IL23AQ9NPF7 189 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 ZNF490Q9ULM2 529 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-211ENST00000641213 PDE10AQ9Y233 779 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 LZTS1Q9Y250 596 aa16.72■□□□□ 0.27
PHGDH-211ENST00000641213 EME2A4GXA9 379 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 EIF3FO00303 357 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 MANBAO00462 879 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 INPP4BO15327 924 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 GPIP06744 558 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PTPN2P17706 415 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PSMC3P17980 439 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 VARSP26640 1264 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SOX11P35716 441 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 POLR2LP62875 67 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 TXNL4AP83876 142 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 GBX1Q14549 363 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 KIAA0040Q15053 153 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 CYP51A1Q16850 503 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SMU1Q2TAY7 513 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 CDKL4Q5MAI5 379 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PRR23BQ6ZRT6 265 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 TRIM46Q7Z4K8 759 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SPHK2Q9NRA0 654 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 ARL15Q9NXU5 204 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 EIF3LQ9Y262 564 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PRRC2BQ5JSZ5 2229 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 A0A1W2PQ67 120 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 FAM149AA5PLN7 773 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 WASH3PC4AMC7 463 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PGM3O95394 542 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PABPC4LP0CB38 370 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 HTR1EP28566 365 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 HMGCS1Q01581 520 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 MAD2L1Q13257 205 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PTGR1Q14914 329 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 FXNQ16595 210 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SLC5A9Q2M3M2 681 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SGO1Q5FBB7 561 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 TMEM215Q68D42 235 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 IYDQ6PHW0 289 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 UBE2R2Q712K3 238 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 DET1Q7L5Y6 550 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 MRPL43Q8N983 215 aaKnown RBP16.71■□□□□ 0.27
PHGDH-211ENST00000641213 TRPV3Q8NET8 790 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 PPM1MQ96MI6 270 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SPATA16Q9BXB7 569 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SLC32A1Q9H598 525 aa16.71■□□□□ 0.27
PHGDH-211ENST00000641213 SAC3D1A6NKF1 404 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 TPST1O60507 370 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 FGF19O95750 216 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 EPORP19235 508 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 HRH2P25021 359 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 FASP25445 335 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 GGT5P36269 586 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 GNPDA1P46926 289 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 GJA8P48165 433 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 OR4D2P58180 307 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 HSPA14Q0VDF9 509 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 PWP1Q13610 501 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 SELPLGQ14242 412 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 DMC1Q14565 340 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 ZXDCQ2QGD7 858 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-211ENST00000641213 PLA2G4EQ3MJ16 856 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 AASDHQ4L235 1098 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-211ENST00000641213 ARHGAP15Q53QZ3 475 aa16.7■□□□□ 0.26
PHGDH-211ENST00000641213 LY6G5CQ5SRR4 150 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms