RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 RMND5BQ96G75 393 aaPredicted RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RPL10LQ96L21 214 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZBTB18Q99592 522 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 SH3GL3Q99963 347 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 NTMT1Q9BV86 223 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 RBM38Q9H0Z9 239 aaKnown RBP8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 OLAHQ9NV23 265 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 KCTD5Q9NXV2 234 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZDHHC3Q9NYG2 299 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRPS1Q9UHF7 1281 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 MAGEL2Q9UJ55 1249 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 TBX21Q9UL17 535 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 OAZ3Q9UMX2 235 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 DMTF1Q9Y222 760 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
SND1-IT1-201ENST00000623342 LEFTY2O00292 366 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 PLOD2O00469 737 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 DLGAP1O14490 977 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 FFAR3O14843 346 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 GPR42O15529 346 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 TGM5O43548 720 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 ULK1O75385 1050 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 RSL1D1O76021 490 aaKnown RBP8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 RASAL1O95294 804 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 EBLN1P0CF75 366 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 EPB42P16452 691 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 CA8P35219 290 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 SOX11P35716 441 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 CTSOP43234 321 aaPredicted RBP8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 STK19P49842 368 aaPredicted RBP8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 DGKQP52824 942 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 OR4D2P58180 307 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 DYNC1I2Q13409 638 aaKnown RBP8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 LRRC66Q68CR7 880 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 GLYATQ6IB77 296 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 BORAQ6PGQ7 559 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 USP45Q70EL2 814 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 RALGPS2Q86X27 583 aaPredicted RBP8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 GALNT13Q8IUC8 556 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 ADGRG2Q8IZP9 1017 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 NSMCE2Q96MF7 247 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 PPM1MQ96MI6 270 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 CGREF1Q99674 301 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 SUV39H2Q9H5I1 410 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 PIF1Q9H611 641 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 RPF2Q9H7B2 306 aaKnown RBP8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 CAAP1Q9H8G2 361 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 KLHL42Q9P2K6 505 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 KLQ9UEF7 1012 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 USP22Q9UPT9 525 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 PPIL1Q9Y3C6 166 aa8.16□□□□□ -1.1
SND1-IT1-201ENST00000623342 A0A1B0GTW7 788 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 CCDC160A6NGH7 325 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ACOX3O15254 700 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 STK16O75716 305 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 KCNH1O95259 989 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 LDLRP01130 860 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ANXA5P08758 320 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 CCL5P13501 91 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF23P17027 643 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 NELFEP18615 380 aaKnown RBP8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 MYF6P23409 242 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 PPM1AP35813 382 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 GNPDA1P46926 289 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 PIK3CGP48736 1102 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 MTPNP58546 118 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 SEMG2Q02383 582 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 MERTKQ12866 999 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 KIAA0040Q15053 153 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 CDKL4Q5MAI5 379 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 B3GNT6Q6ZMB0 384 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRIM46Q7Z4K8 759 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 CMTM8Q8IZV2 173 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 TRIML2Q8N7C3 387 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 FAM47BQ8NA70 645 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 OR8J3Q8NGG0 315 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZFP28Q8NHY6 868 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 HM13Q8TCT9 377 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 OSCP1Q8WVF1 389 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC13A3Q8WWT9 602 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 VOPP1Q96AW1 172 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ULK4Q96C45 1275 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ECHDC3Q96DC8 303 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 LMLNQ96KR4 655 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 COPS8Q99627 209 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ADI1Q9BV57 179 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 CLK4Q9HAZ1 481 aaKnown RBP8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 TMEM39AQ9NV64 488 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 SMOXQ9NWM0 555 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 PTTG2Q9NZH5 202 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 ZNF490Q9ULM2 529 aaPredicted RBP8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 SLC8A2Q9UPR5 921 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 HS3ST2Q9Y278 367 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 A0A1W2PRU2 124 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 LOC730098B7Z3J9 87 aa8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 EIF3FO00303 357 aaPredicted RBP8.15□□□□□ -1.1
SND1-IT1-201ENST00000623342 MANBAO00462 879 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms