RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 ATG10Q9H0Y0 220 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 CLDND1Q9NY35 253 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 MRASO14807 208 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 SYNCRIPO60506 623 aaKnown RBP9.74□□□□□ -0.85
VTA1-205ENST00000620996 MAP4P27816 1152 aaKnown RBP9.74□□□□□ -0.85
VTA1-205ENST00000620996 CTSCP53634 463 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 IMPG1Q17R60 797 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 MAP7D1Q3KQU3 841 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 SLC44A4Q53GD3 710 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 REP15Q6BDI9 236 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 ANKRD54Q6NXT1 300 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 TMEM220Q6QAJ8 160 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 CRTC3Q6UUV7 619 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 CYHR1Q6ZMK1 362 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 EFL1Q7Z2Z2 1120 aaKnown RBP9.74□□□□□ -0.85
VTA1-205ENST00000620996 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 FBXW8Q8N3Y1 598 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 FOXJ1Q92949 421 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 TMEM159Q96B96 161 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 PDLIM5Q96HC4 596 aaKnown RBP9.74□□□□□ -0.85
VTA1-205ENST00000620996 LRIG1Q96JA1 1093 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 ZNF385DQ9H6B1 395 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 ACTR8Q9H981 624 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 PFDN4Q9NQP4 134 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 RIC8BQ9NVN3 520 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 SPATA7Q9P0W8 599 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 ZNF225Q9UK10 706 aa9.74□□□□□ -0.85
VTA1-205ENST00000620996 TMEM202A6NGA9 273 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 A6NHS1 94 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ANGPT2O15123 496 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 TAPBPO15533 448 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 HNRNPRO43390 633 aaKnown RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 RECQL5O94762 991 aaPredicted RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 WDR47O94967 919 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PCDH8O95206 1070 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 OTCP00480 354 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 FTH1P02794 183 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 FGF4P08620 206 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 POU2F2P09086 479 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ETS2P15036 469 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 EPB42P16452 691 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PSMC3P17980 439 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 FCARP24071 287 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 SOX11P35716 441 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PTK2BQ14289 1009 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 MUM1Q2TAK8 710 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 VPS26BQ4G0F5 336 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ATP6AP1LQ52LC2 224 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 SULT1C3Q6IMI6 304 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 CXorf40AQ8TE69 158 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 FGF14Q92915 247 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 GLYATL1Q969I3 302 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 TIFAQ96CG3 184 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 NUS1Q96E22 293 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ZNF382Q96SR6 550 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 CDCA3Q99618 268 aaPredicted RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 SLC39A3Q9BRY0 314 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 OR2AG1Q9H205 316 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 C1QTNF3-AMACRE9PGA6 284 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 K7ESM1 405 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 OR7A17O14581 309 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 LSM1O15116 133 aaKnown RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 KLK8O60259 260 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 STK16O75716 305 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 HNRNPCP07910 306 aaKnown RBP eCLIP9.73□□□□□ -0.853e-9■□□□□ 9.7
VTA1-205ENST00000620996 C6P13671 934 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ADRB3P13945 408 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 CYP2A7P20853 494 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 AOAHP28039 575 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 TIE1P35590 1138 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PTDSS1P48651 473 aaKnown RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 PLIN5Q00G26 463 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 EIF4HQ15056 248 aaKnown RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 CPSF6Q16630 551 aaKnown RBP eCLIP9.73□□□□□ -0.85
VTA1-205ENST00000620996 DSG4Q86SJ6 1040 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PHYKPLQ8IUZ5 450 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 LILRA3Q8N6C8 439 aaPredicted RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 BTN2A2Q8WVV5 523 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 C17orf50Q8WW18 174 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 RHBDF1Q96CC6 855 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 MED8Q96G25 268 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 TMEM79Q9BSE2 394 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 CD244Q9BZW8 370 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 RAD18Q9NS91 495 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PDE10AQ9Y233 779 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 SLC22A2O15244 555 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 APODP05090 189 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ITGB7P26010 798 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 OPRD1P41143 372 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 THOP1P52888 689 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PSME3P61289 254 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 AP2B1P63010 937 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ELP6Q0PNE2 266 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 TMEM115Q12893 351 aaPredicted RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 GAB4Q2WGN9 574 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 HENMT1Q5T8I9 393 aaKnown RBP9.73□□□□□ -0.85
VTA1-205ENST00000620996 RASGEF1AQ8N9B8 481 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 PDPRQ8NCN5 879 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 ASZ1Q8WWH4 475 aa9.73□□□□□ -0.85
VTA1-205ENST00000620996 SLC25A23Q9BV35 468 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms