RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 Q6ZVL8 140 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 USP45Q70EL2 814 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 LPCAT2Q7L5N7 544 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 CHST15Q7LFX5 561 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR10A6Q8NH74 314 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 PROKR1Q8TCW9 393 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZFAND2BQ8WV99 257 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HIST1H2AHQ96KK5 128 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 HIST1H2AJQ99878 128 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 H2AFJQ9BTM1 129 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 WRAP53Q9BUR4 548 aaKnown RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 SUV39H2Q9H5I1 410 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 ELOVL6Q9H5J4 265 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 CD300AQ9UGN4 299 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 SLC25A13Q9UJS0 675 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 OR51B4Q9Y5P0 310 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 MAGED1Q9Y5V3 778 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 U3KQV3 271 aa11.32□□□□□ -0.6
ARHGEF1-220ENST00000600274 ASPDHA6ND91 283 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 STX16O14662 325 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 EI24O14681 340 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 LHCGRP22888 699 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ACRV1P26436 265 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 YAP1P46937 504 aaKnown RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TTLL9Q3SXZ7 439 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 SPANXN4Q5MJ08 99 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 GLYATQ6IB77 296 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CLVS1Q8IUQ0 354 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 NXPE1Q8N323 547 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ELMO1Q92556 727 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 FBXL20Q96IG2 436 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 NSMCE2Q96MF7 247 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 BRD9Q9H8M2 597 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZDHHC7Q9NXF8 308 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 PCDHB1Q9Y5F3 818 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 BBIP1A8MTZ0 92 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 KPNA3O00505 521 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 STK16O75716 305 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TFPTP0C1Z6 253 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 IST1P53990 364 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 MYLK3Q32MK0 819 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 C22orf39Q6P5X5 142 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CERS6Q6ZMG9 384 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CMTR2Q8IYT2 770 aaKnown RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 PNPT1Q8TCS8 783 aaKnown RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ACDQ96AP0 544 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TMIGD2Q96BF3 282 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ALG14Q96F25 216 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 PARVBQ9HBI1 364 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CROCCQ5TZA2 2017 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TAPBPO15533 448 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CXCL10P02778 98 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZNF26P17031 533 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ETV3P41162 512 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ERVFC1P60507 584 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TNK2Q07912 1038 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 MAPKAPK3Q16644 382 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ASTLQ6HA08 431 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 EFL1Q7Z2Z2 1120 aaKnown RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 SPATA19Q7Z5L4 167 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 VRK3Q8IV63 474 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CLEC4FQ8N1N0 589 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 C2orf73Q8N5S3 287 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 DRAXINQ8NBI3 349 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TMEM125Q96AQ2 219 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 APOLD1Q96LR9 279 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZNF382Q96SR6 550 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 P2RY12Q9H244 342 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 CERS4Q9HA82 394 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 MRGBPQ9NV56 204 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 EIF3LQ9Y262 564 aaKnown RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 SLC22A14Q9Y267 594 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 TNPO3Q9Y5L0 923 aaKnown RBP11.31□□□□□ -0.6
ARHGEF1-220ENST00000600274 SZT2Q5T011 3432 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 GAPDHSO14556 408 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 FZD6O60353 706 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 VPS4BO75351 444 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 GLUD1P00367 558 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 TYRP14679 529 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 CCR7P32248 378 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 PSMD7P51665 324 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 CCR3P51677 355 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 GRAMD4Q6IC98 578 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 TTC33Q6PID6 262 aaPredicted RBP11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ANGPTL8Q6UXH0 198 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 RGL4Q8IZJ4 473 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 ZFP28Q8NHY6 868 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 RIN3Q8TB24 985 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 DTNBP1Q96EV8 351 aa11.3□□□□□ -0.6
ARHGEF1-220ENST00000600274 TRMT2BQ96GJ1 504 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms