RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 ZRANB2O95218 330 aaKnown RBP eCLIP8.15□□□□□ -1.1
DNMT1-219ENST00000589349 TRBC1P01850 177 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 AMY2AP04746 511 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ATP1A1P05023 1023 aaKnown RBP8.15□□□□□ -1.1
DNMT1-219ENST00000589349 AMY2BP19961 511 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 CETN2P41208 172 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ACTR1BP42025 376 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 MAPK9P45984 424 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ZNF75DP51815 510 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 INHBCP55103 352 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 MAZP56270 477 aaKnown RBP8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ACTR1AP61163 376 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 CXADRP78310 365 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 PEX6Q13608 980 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 RTP5Q14D33 572 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 TBC1D25Q3MII6 688 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 C14orf28Q4W4Y0 310 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 KCTD16Q68DU8 428 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 MFSD7Q6UXD7 560 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 PID1Q7Z2X4 250 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 FGD2Q7Z6J4 655 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 FBXO39Q8N4B4 442 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ARL14Q8N4G2 192 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 CISD2Q8N5K1 135 aaKnown RBP8.15□□□□□ -1.1
DNMT1-219ENST00000589349 SLC25A41Q8N5S1 370 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 PLD5Q8N7P1 536 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 SPC24Q8NBT2 197 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 OR6C4Q8NGE1 309 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 WDR48Q8TAF3 677 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 GDAP1Q8TB36 358 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 FAM71BQ8TC56 605 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 MAML1Q92585 1016 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 HDAC11Q96DB2 347 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 PRR11Q96HE9 360 aaPredicted RBP8.15□□□□□ -1.1
DNMT1-219ENST00000589349 TBATAQ96M53 351 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 HEMGNQ9BXL5 484 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 TDRD1Q9BXT4 1180 aaKnown RBP8.15□□□□□ -1.1
DNMT1-219ENST00000589349 CDH19Q9H159 772 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 LRRN3Q9H3W5 708 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 GOLPH3Q9H4A6 298 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 OSGEPL1Q9H4B0 414 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 FAM83DQ9H4H8 585 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 POLR1BQ9H9Y6 1135 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ARFGAP3Q9NP61 516 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 TAAR2Q9P1P5 351 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 PISDQ9UG56 409 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 AMACRQ9UHK6 382 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 INTUQ9ULD6 942 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 NENFQ9UMX5 172 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 ALG6Q9Y672 507 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 RNF215Q9Y6U7 377 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 U3KQA8 63 aa8.15□□□□□ -1.1
DNMT1-219ENST00000589349 PTPRBP23467 1997 aa8.15□□□□□ -1.11
DNMT1-219ENST00000589349 SHROOM3Q8TF72 1996 aa8.15□□□□□ -1.11
DNMT1-219ENST00000589349 KNTC1P50748 2209 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 CHD5Q8TDI0 1954 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 PLXNB3Q9ULL4 1909 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 A0A0A6YYK5 440 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 CAPN8A6NHC0 703 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ANKRD66B4E2M5 251 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TMX2-CTNND1H3BSU7 103 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 CASC3O15234 703 aaKnown RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TLX3O43711 291 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TCEA3O75764 348 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 PYGLP06737 847 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 HOXC4P09017 264 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ENO2P09104 434 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ZNF30P17039 623 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TRIM23P36406 574 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ADCY8P40145 1251 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 LSSP48449 732 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 MAPK10P53779 464 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 OR1D5P58170 312 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 RPL26P61254 145 aaKnown RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 PPIDQ08752 370 aaKnown RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ZBTB17Q13105 803 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TFDP3Q5H9I0 405 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 LRRC38Q5VT99 294 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 CD276Q5ZPR3 534 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TTLL10Q6ZVT0 673 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 RAB11FIP2Q7L804 512 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 CHST15Q7LFX5 561 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 SFTPA2Q8IWL1 248 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 CCDC170Q8IYT3 715 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 RCOR2Q8IZ40 523 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 NRSN1Q8IZ57 195 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TC2NQ8N9U0 490 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ZNF248Q8NDW4 579 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 EXD1Q8NHP7 514 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 SPATA22Q8NHS9 363 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 WDR36Q8NI36 951 aaKnown RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ARRDC2Q8TBH0 407 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 KCNE4Q8WWG9 221 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 FAF2Q96CS3 445 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 RBM41Q96IZ5 413 aaKnown RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 ZNF578Q96N58 590 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-219ENST00000589349 TTC25Q96NG3 672 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 OR2M4Q96R27 311 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 AGAP2Q99490 1192 aa8.14□□□□□ -1.11
DNMT1-219ENST00000589349 SPATA25Q9BR10 227 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms