RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	RHCE	P18577	417 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	ITPKB	P27987	946 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	AKT2	P31751	481 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	STAT1	P42224	750 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	NEK3	P51956	506 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	RHD	Q02161	417 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	SLC20A2	Q08357	652 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	TPRG1L	Q5T0D9	272 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	MANEAL	Q5VSG8	457 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	PPP4R4	Q6NUP7	873 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	NEK5	Q6P3R8	708 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	SCYL2	Q6P3W7	929 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	WDR59	Q6PJI9	974 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	ZNF783	Q6ZMS7	281 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	PARS2	Q7L3T8	475 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	PTAR1	Q7Z6K3	402 aa	Predicted RBP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	NLRP14	Q86W24	1093 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	TMPRSS12	Q86WS5	348 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	ZNF677	Q86XU0	584 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	PCDH20	Q8N6Y1	951 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	NEK11	Q8NG66	645 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	CENPI	Q92674	756 aa	Predicted RBP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	SCAMP4	Q969E2	229 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	VOPP1	Q96AW1	172 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	SLC17A9	Q9BYT1	436 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	HSD3B7	Q9H2F3	369 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	GPR35	Q9HC97	309 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	SEPT11	Q9NVA2	429 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	GPRC5B	Q9NZH0	403 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	ADAM22	Q9P0K1	906 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	LIMA1	Q9UHB6	759 aa	Known RBP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	FADS3	Q9Y5Q0	445 aa		7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	7.1	□□□□□ -1.27
MARK3-223	ENST00000561071	DOCK4	Q8N1I0	1966 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	CASC3	O15234	703 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	INSIG1	O15503	277 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	PHGDH	O43175	533 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	CCP110	O43303	1012 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	BUB1	O43683	1085 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TLX3	O43711	291 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	CREB3	O43889	395 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	MAGEC1	O60732	1142 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	RAMP2	O60895	175 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	PIAS2	O75928	621 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	ZFPL1	O95159	310 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	UGT2B4	P06133	528 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	GPD1	P21695	349 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	HNRNPA2B1	P22626	353 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	NUDT1	P36639	197 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	PTPN9	P43378	593 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	NSF	P46459	744 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	KCNJ5	P48544	419 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	RPL7A	P62424	266 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	RPS21	P63220	83 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	OGDH	Q02218	1023 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	UBXN1	Q04323	297 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	CCDC15	Q0P6D6	951 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	OVGP1	Q12889	678 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TUBA3C	Q13748	450 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	FZD2	Q14332	565 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	POLD3	Q15054	466 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	MYLK3	Q32MK0	819 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	BEAN1	Q3B7T3	259 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	ARL13B	Q3SXY8	428 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	SOWAHC	Q53LP3	525 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	RNF220	Q5VTB9	566 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	FNDC7	Q5VTL7	733 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TUBA3E	Q6PEY2	450 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	SASS6	Q6UVJ0	657 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TRIM72	Q6ZMU5	477 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	CLEC17A	Q6ZS10	378 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	RBM43	Q6ZSC3	357 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	ARC	Q7LC44	396 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	STRADA	Q7RTN6	431 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	APTX	Q7Z2E3	356 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	ABI3BP	Q7Z7G0	1075 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	ZNF354C	Q86Y25	554 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	PHF13	Q86YI8	300 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TMEM132C	Q8N3T6	1108 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TBC1D31	Q96DN5	1066 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	HMCES	Q96FZ2	354 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	FEM1C	Q96JP0	617 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	BBC3	Q96PG8	261 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	KLF6	Q99612	283 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	AGPAT1	Q99943	283 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	SELENOO	Q9BVL4	669 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TINAGL1	Q9GZM7	467 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TCEAL2	Q9H3H9	227 aa	Predicted RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TMEM248	Q9NWD8	314 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	GPATCH2L	Q9NWQ4	482 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	GEMIN8	Q9NWZ8	242 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	TAS2R14	Q9NYV8	317 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	DKK4	Q9UBT3	224 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	PCDHGB6	Q9Y5F9	930 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	PCDHGA1	Q9Y5H4	931 aa		7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	GCN1	Q92616	2671 aa	Known RBP	7.09	□□□□□ -1.27
MARK3-223	ENST00000561071	COL5A1	P20908	1838 aa	Predicted RBP	7.08	□□□□□ -1.28
MARK3-223	ENST00000561071	TRPM6	Q9BX84	2022 aa		7.08	□□□□□ -1.28
MARK3-223	ENST00000561071	LOC400499	M0QZD8	3231 aa		7.08	□□□□□ -1.28
MARK3-223	ENST00000561071	LY6G6E	A0A0G2JKS1	128 aa		7.08	□□□□□ -1.28

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