RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 DTX3LQ8TDB6 740 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 CPLX3Q8WVH0 158 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A7Q9HAW7 530 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A10Q9HAW8 530 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 UGT1A8Q9HAW9 530 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 PKP3Q9Y446 797 aa17.27■□□□□ 0.36
TSPAN3-208ENST00000560514 ANKRD12Q6UB98 2062 aa17.27■□□□□ 0.35
TSPAN3-208ENST00000560514 MYO7BQ6PIF6 2116 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 CCDC66A2RUB6 948 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 E2F3O00716 465 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 OR2B3O76000 313 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 MT-CYBP00156 380 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 POLBP06746 335 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 STSP08842 583 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 CBSLP0DN79 551 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 PTGER4P35408 488 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 CBSP35520 551 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 DCDP81605 110 aaKnown RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 ART3Q13508 389 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 ZNF169Q14929 603 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 IQCB1Q15051 598 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 SLC14A2Q15849 920 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 AGAP7PQ5VUJ5 663 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 ZNF385CQ66K41 422 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 FCRL6Q6DN72 434 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 PARP9Q8IXQ6 854 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 PQLC3Q8N755 202 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 OR2L2Q8NH16 312 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 SPATA22Q8NHS9 363 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 PROKR1Q8TCW9 393 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 SYN2Q92777 582 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 FAF2Q96CS3 445 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 NAP1L5Q96NT1 182 aaPredicted RBP17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 AGAP4Q96P64 663 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 CCM2Q9BSQ5 444 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 AP1M1Q9BXS5 423 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 KLHL25Q9H0H3 589 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 TXLNGQ9NUQ3 528 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 IRAK4Q9NWZ3 460 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 CSAG2Q9Y5P2 127 aa17.26■□□□□ 0.35
TSPAN3-208ENST00000560514 ADGRG4Q8IZF6 3080 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 C2orf74A8MZ97 194 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 AGPSO00116 658 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 PPP1R12AO14974 1030 aaPredicted RBP17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 B3GNTL1Q67FW5 361 aaPredicted RBP17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 NXPE1Q8N323 547 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 IQCDQ96DY2 449 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 LURAP1Q96LR2 239 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 DEF6Q9H4E7 631 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 EPS8L2Q9H6S3 715 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 SUCOQ9UBS9 1254 aaKnown RBP17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 KLF2Q9Y5W3 355 aaPredicted RBP17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 PCM1Q15154 2024 aa17.25■□□□□ 0.35
TSPAN3-208ENST00000560514 CSMD2Q7Z408 3487 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 DOCK10Q96BY6 2186 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 A0A0A6YYK5 440 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 MASP2O00187 686 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 GPR39O43194 453 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 SERPINC1P01008 464 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 COX6B1P14854 86 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 PVRP15151 417 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 PDK1Q15118 436 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 TLR1Q15399 786 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 FAM182AQ5T1J6 154 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 E4F1Q66K89 784 aaPredicted RBP17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 RHBDD2Q6NTF9 364 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 CDHR3Q6ZTQ4 885 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 GLT6D1Q7Z4J2 308 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 PPP1R32Q7Z5V6 425 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 CFAP206Q8IYR0 622 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 BCORP1Q8N888 145 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 RBM41Q96IZ5 413 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 RMDN2Q96LZ7 410 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 RNF157Q96PX1 679 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 MAK16Q9BXY0 300 aaKnown RBP17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 PITPNM3Q9BZ71 974 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 GLOD4Q9HC38 313 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 CHST11Q9NPF2 352 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 OLAHQ9NV23 265 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 UBP1Q9NZI7 540 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 HACD3Q9P035 362 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 CDYLQ9Y232 598 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 NUP210LQ5VU65 1888 aa17.24■□□□□ 0.35
TSPAN3-208ENST00000560514 IFRD1O00458 451 aaPredicted RBP17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 BTN3A1O00481 513 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 JRKO75564 520 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 CYP1A2P05177 515 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 SNRPB2P08579 225 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 TPM4P67936 248 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 SLC9A5Q14940 896 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 PRAMEF13Q5VWM6 474 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 CAVIN1Q6NZI2 390 aaKnown RBP17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 SARM1Q6SZW1 724 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 ZNF398Q8TD17 642 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 BLOC1S5Q8TDH9 187 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 TADA1Q96BN2 335 aa17.23■□□□□ 0.35
TSPAN3-208ENST00000560514 DCUN1D1Q96GG9 259 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms