RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PACS1Q6VY07 963 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ARHGEF18Q6ZSZ5 1173 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 DET1Q7L5Y6 550 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 PEX26Q7Z412 305 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 LINC00523Q86TU6 105 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CFAP206Q8IYR0 622 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 UBL4BQ8N7F7 174 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 SLC35B2Q8TB61 432 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CT55Q8WUE5 264 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 STYXQ8WUJ0 223 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 THAP4Q8WY91 577 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF501Q96CX3 271 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ELMO2Q96JJ3 720 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 APOL2Q9BQE5 337 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 PITPNM3Q9BZ71 974 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 TRIM4Q9C037 500 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CHRNA10Q9GZZ6 450 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 EPN3Q9H201 632 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 OR52A5Q9H2C5 316 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 MVB12BQ9H7P6 319 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 COG4Q9H9E3 785 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 FANCEQ9HB96 536 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 KCND1Q9NSA2 647 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 NLE1Q9NVX2 485 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ZDHHC3Q9NYG2 299 aa6.43□□□□□ -1.38
SLIRP-203ENST00000554074 MRPS18BQ9Y676 258 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 CFAP20Q9Y6A4 193 aaKnown RBP6.43□□□□□ -1.38
SLIRP-203ENST00000554074 ICE1Q9Y2F5 2266 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PIPSLA2A3N6 862 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CLEC18AA5D8T8 446 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 IFRD1O00458 451 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 LIN7AO14910 233 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 MAP3K7O43318 606 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 KATNA1O75449 491 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 SCRG1O75711 98 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 METTL18O95568 372 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 AP2A1O95782 977 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 POLBP06746 335 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 KLK3P07288 261 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 FURINP09958 794 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 RAB40ALP0C0E4 278 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CDH3P22223 829 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 STIP1P31948 543 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 NSG1P42857 185 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 RPS15P62841 145 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 TMPRSS15P98073 1019 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PLOD1Q02809 727 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 GPS2Q13227 327 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 SEMA5AQ13591 1074 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 BOP1Q14137 746 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 KRT33BQ14525 404 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 ITIH4Q14624 930 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 SKIDA1Q1XH10 827 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PAPD7Q5XG87 772 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 AADACL2Q6P093 401 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CLEC18BQ6UXF7 455 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CERS6Q6ZMG9 384 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 SERPINA9Q86WD7 417 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PTRH1Q86Y79 214 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 TMEM126BQ8IUX1 230 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 DSELQ8IZU8 1212 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 FAM71DQ8N9W8 422 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CLEC18CQ8NCF0 446 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 ACRBPQ8NEB7 543 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 OR4E2Q8NGC2 313 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 LCN9Q8WX39 176 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CPT1BQ92523 772 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PEX13Q92968 403 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CDKN2AIPNLQ96HQ2 116 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 HES6Q96HZ4 224 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 DNAJC1Q96KC8 554 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 ALS2CR12Q96Q35 445 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 FAM118BQ9BPY3 351 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 DPH2Q9BQC3 489 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 FRMD8P1Q9BZ68 369 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 TWSG1Q9GZX9 223 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 SRMSQ9H3Y6 488 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 ACTL8Q9H568 366 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 MLXIPLQ9NP71 852 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 ZNF71Q9NQZ8 489 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 RIMKLBQ9ULI2 386 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 TP53TG5Q9Y2B4 290 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 MAN2B2Q9Y2E5 1009 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PPP2R2CQ9Y2T4 447 aa6.42□□□□□ -1.38
SLIRP-203ENST00000554074 PCDHGA9Q9Y5G4 932 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 SPTAN1Q13813 2472 aaKnown RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 USP9XQ93008 2570 aaPredicted RBP6.42□□□□□ -1.38
SLIRP-203ENST00000554074 CDC14CA4D256 554 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SLC9B1P1A6NJY1 282 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 C2orf74A8MZ97 194 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 F8W8V4 182 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 MEN1O00255 615 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 BTN3A3O00478 584 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 BTN3A1O00481 513 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 DDX3YO15523 660 aaKnown RBP6.41□□□□□ -1.38
SLIRP-203ENST00000554074 SUN1O94901 812 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 FTH1P02794 183 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 NTRK1P04629 796 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 HBQ1P09105 142 aa6.41□□□□□ -1.38
SLIRP-203ENST00000554074 POLR2CP19387 275 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms