RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	COPG2	Q9UBF2	871 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLC23A2	Q9UGH3	650 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	APOBEC3B	Q9UH17	382 aa	Known RBP	11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	PILRB	Q9UKJ0	227 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	EMCN	Q9ULC0	261 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	CDYL	Q9Y232	598 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLCO1B1	Q9Y6L6	691 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	PIKFYVE	Q9Y2I7	2098 aa		11.37	□□□□□ -0.59
CNOT2-223	ENST00000550160	ATXN2	Q99700	1313 aa	Known RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	EML5	Q05BV3	1969 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	KDM1A	O60341	852 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	H2AFY	O75367	372 aa	Known RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	CSF2	P04141	144 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	DHRS4L1	P0CG22	281 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	GFAP	P14136	432 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	NME1	P15531	152 aa	Known RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ATP5F1	P24539	256 aa	Predicted RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ACTR1B	P42025	376 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ETV4	P43268	484 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	SERPINB4	P48594	390 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ARRB1	P49407	418 aa	Predicted RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	PRKAA2	P54646	552 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	AP1S2	P56377	157 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ACTR1A	P61163	376 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	MPP2	Q14168	576 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ELOC	Q15369	112 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	DUOXA1	Q1HG43	343 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	UAP1L1	Q3KQV9	507 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	LAYN	Q6UX15	382 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	WASH2P	Q6VEQ5	465 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	CYHR1	Q6ZMK1	362 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	UBE2R2	Q712K3	238 aa	Predicted RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	VRK3	Q8IV63	474 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	NUDCD3	Q8IVD9	361 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	SDR16C5	Q8N3Y7	309 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	LILRA3	Q8N6C8	439 aa	Predicted RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	CFAP61	Q8NHU2	1237 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ASB11	Q8WXH4	323 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	EXT2	Q93063	718 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	LOXL4	Q96JB6	756 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	EGFL8	Q99944	293 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLC12A9	Q9BXP2	914 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	TMEM168	Q9H0V1	697 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	OR52A5	Q9H2C5	316 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	C12orf65	Q9H3J6	166 aa	Known RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	RDH14	Q9HBH5	336 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	PARVB	Q9HBI1	364 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	MLXIPL	Q9NP71	852 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	C11orf16	Q9NQ32	467 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	WASH6P	Q9NQA3	447 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	NUDT4	Q9NZJ9	180 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	CD274	Q9NZQ7	290 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	SPAST	Q9UBP0	616 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	GULP1	Q9UBP9	304 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	DOLK	Q9UPQ8	538 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	ASF1A	Q9Y294	204 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	OARD1	Q9Y530	152 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160	HEBP2	Q9Y5Z4	205 aa		11.36	□□□□□ -0.59
CNOT2-223	ENST00000550160		A0A1B0GVT2	93 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	GFY	I3L273	518 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	SCAMP1	O15126	338 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	PSIP1	O75475	530 aa	Known RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	IPO13	O94829	963 aa	Known RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	MATN4	O95460	622 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	CFI	P05156	583 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	ANXA5	P08758	320 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	HOXB3	P14651	431 aa	Predicted RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	RPL10	P27635	214 aa	Known RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	PDHA2	P29803	388 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	MDH1	P40925	334 aa	Known RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	NAA20	P61599	178 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	CDKL1	Q00532	357 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	ABR	Q12979	859 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	KRT33B	Q14525	404 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	TGFBI	Q15582	683 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	OR4D1	Q15615	310 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	ZNF542P	Q5EBM4	170 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	PRRT3	Q5FWE3	981 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	CDKL4	Q5MAI5	379 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	SLC30A9	Q6PML9	568 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	TAF8	Q7Z7C8	310 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	GKN2	Q86XP6	184 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	SPATS2	Q86XZ4	545 aa	Known RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	TCAIM	Q8N3R3	496 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	FBXO39	Q8N4B4	442 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	RAB42	Q8N4Z0	105 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	GPBAR1	Q8TDU6	330 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	TFG	Q92734	400 aa	Predicted RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	ATOH8	Q96SQ7	321 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	WWP1	Q9H0M0	922 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	ERVMER34-1	Q9H9K5	563 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	UTP6	Q9NYH9	597 aa	Known RBP	11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	PSMD13	Q9UNM6	376 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	THADA	Q6YHU6	1953 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	ABCA7	Q8IZY2	2146 aa		11.35	□□□□□ -0.59
CNOT2-223	ENST00000550160	TARM1	B6A8C7	271 aa		11.34	□□□□□ -0.59
CNOT2-223	ENST00000550160		G3V2L1	256 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms