RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 CASP8AP2Q9UKL3 1982 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 H3BNC9 293 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 OR7A17O14581 309 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 INPPL1O15357 1258 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HNRNPCP07910 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ACRP10323 421 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SLC26A3P40879 764 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 IL5RAQ01344 420 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 NFATC2Q13469 925 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 FGD3Q5JSP0 725 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 CACHD1Q5VU97 1274 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SPATA19Q7Z5L4 167 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HID1Q8IV36 788 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 KCNJ9Q92806 393 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 MBD1Q9UIS9 605 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HIST1H2AGP0C0S8 130 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 CHRM1P11229 460 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 BPIP17213 487 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HIST1H2ADP20671 130 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HRH2P25021 359 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 DNAJB1P25685 340 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 RFC2P35250 354 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 NFKB2Q00653 900 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 GALNT1Q10472 559 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ANKDD1AQ495B1 522 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HIST1H2AHQ96KK5 128 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 HIST1H2AJQ99878 128 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 H2AFJQ9BTM1 129 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 RIBC2Q9H4K1 309 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 LRTM1Q9HBL6 345 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF334Q9HCZ1 680 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 RASSF1Q9NS23 344 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SLC8A2Q9UPR5 921 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 SLC22A14Q9Y267 594 aa13.41□□□□□ -0.26
PRPF40B-209ENST00000548825 FAM234BA2RU67 622 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 NPIPB15A6NHN6 443 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 AQP12BA6NM10 295 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 NEDD8-MDP1E9PL57 170 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 DEAF1O75398 565 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 CD160O95971 181 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 ANXA6P08133 673 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 TACR1P25103 407 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 CLCN2P51788 898 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 CYP27C1Q4G0S4 372 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 Q6ZVU0 165 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 UTS2BQ765I0 119 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 AQP12AQ8IXF9 295 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 ZBTB2Q8N680 514 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 GPR150Q8NGU9 434 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 ZNF461Q8TAF7 563 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 FRS2Q8WU20 508 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 GPATCH1Q9BRR8 931 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 C2orf49Q9BVC5 232 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 TRIM54Q9BYV2 358 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 PRDM8Q9NQV8 689 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 SLC6A13Q9NSD5 602 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 PRUNE2Q8WUY3 3088 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 IGLV3-27P01718 113 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 FTH1P02794 183 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 URODP06132 367 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 CDK4P11802 303 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 XPAP23025 273 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 CCT8P50990 548 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 CLCN7P51798 805 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 EPHB3P54753 998 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 ATP13A5Q4VNC0 1218 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 OGFOD2Q6N063 350 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 C16orf87Q6PH81 154 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 TXNDC11Q6PKC3 985 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 UBE2R2Q712K3 238 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 RBFAQ8N0V3 343 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 DPH2Q9BQC3 489 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 INPP5KQ9BT40 448 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 AMBNQ9NP70 447 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 COMMD8Q9NX08 183 aa13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 IFT80Q9P2H3 777 aaPredicted RBP13.4□□□□□ -0.26
PRPF40B-209ENST00000548825 G3V2T6 193 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 SAP18O00422 153 aaKnown RBP13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 RGS14O43566 566 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 STK16O75716 305 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 BMP2P12643 396 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 HOXB8P17481 243 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 DGKAP23743 735 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 PHEXP78562 749 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 CBX2Q14781 532 aaPredicted RBP13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 NCEH1Q6PIU2 408 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 SBSNQ6UWP8 590 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
PRPF40B-209ENST00000548825 KLHDC8BQ8IXV7 354 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms