RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 LOC101059948A0A1B0GTJ6 334 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 CCDC162PA2VCL2 907 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 KIAA0754O94854 1291 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 RECKO95980 971 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 FGGP02679 453 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 FOLR1P15328 257 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 DLSTP36957 453 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 PPP1CAP62136 330 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 ACVR1Q04771 509 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 ZNF658BQ4V348 819 aaPredicted RBP11.08□□□□□ -0.64
BEST3-209ENST00000548658 CCDC38Q502W7 563 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 FASTKD1Q53R41 847 aaKnown RBP11.08□□□□□ -0.64
BEST3-209ENST00000548658 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
BEST3-209ENST00000548658 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 TSTD2Q5T7W7 516 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 DUS1LQ6P1R4 473 aaKnown RBP11.08□□□□□ -0.64
BEST3-209ENST00000548658 UNC5BQ8IZJ1 945 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 EXD3Q8N9H8 876 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 GALNT6Q8NCL4 622 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 PPHLN1Q8NEY8 458 aaKnown RBP11.08□□□□□ -0.64
BEST3-209ENST00000548658 OR13J1Q8NGT2 312 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 OR6P1Q8NGX9 317 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 OR4L1Q8NH43 312 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 NAT14Q8WUY8 206 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 STARD8Q92502 1023 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 HDAC10Q969S8 669 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 ELMO2Q96JJ3 720 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 FANCEQ9HB96 536 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 KCND1Q9NSA2 647 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 STARD5Q9NSY2 213 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 POLG2Q9UHN1 485 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 BTRCQ9Y297 605 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 HEMK1Q9Y5R4 338 aaPredicted RBP11.08□□□□□ -0.64
BEST3-209ENST00000548658 KALRNO60229 2985 aa11.08□□□□□ -0.64
BEST3-209ENST00000548658 BAHCC1Q9P281 2608 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 C2orf74A8MZ97 194 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 C21orf140B9A014 251 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 NKX2-8O15522 239 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 FAM87AP0C7U9 286 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 MSL3P1P0C860 447 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 PLA2G2AP14555 144 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 ZNF28P17035 718 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 POLR2CP19387 275 aaPredicted RBP11.07□□□□□ -0.64
BEST3-209ENST00000548658 CDH3P22223 829 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 FOXN2P32314 431 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 RPL22P35268 128 aaKnown RBP11.07□□□□□ -0.64
BEST3-209ENST00000548658 NPY2RP49146 381 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 SARNPP82979 210 aaKnown RBP11.07□□□□□ -0.64
BEST3-209ENST00000548658 CDK16Q00536 496 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 CDC20Q12834 499 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 BOP1Q14137 746 aaKnown RBP11.07□□□□□ -0.64
BEST3-209ENST00000548658 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 HOOK3Q86VS8 718 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 AMIGO1Q86WK6 493 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 TBC1D21Q8IYX1 336 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 LILRA3Q8N6C8 439 aaPredicted RBP11.07□□□□□ -0.64
BEST3-209ENST00000548658 APOBEC4Q8WW27 367 aaKnown RBP11.07□□□□□ -0.64
BEST3-209ENST00000548658 ELMO1Q92556 727 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 TLR10Q9BXR5 811 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 GPR87Q9BY21 358 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 IL22Q9GZX6 179 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 SLC25A18Q9H1K4 315 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 LHX9Q9NQ69 397 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 LATS2Q9NRM7 1088 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 SOHLH2Q9NX45 425 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 BFARQ9NZS9 450 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 POMT2Q9UKY4 750 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 ASF1AQ9Y294 204 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 TCAF1Q9Y4C2 921 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 PCDHGA6Q9Y5G7 932 aa11.07□□□□□ -0.64
BEST3-209ENST00000548658 PIKFYVEQ9Y2I7 2098 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 CCDC78A2IDD5 438 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 GSAPA4D1B5 854 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 J3QKU1 62 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 PFDN6O15212 129 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 CEP104O60308 925 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 CPNE3O75131 537 aaKnown RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 GOT2P00505 430 aaKnown RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 RPN2P04844 631 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 KLK3P07288 261 aaPredicted RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 EBLN1P0CF75 366 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 PRSS56P0CW18 603 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 ETS1P14921 441 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 ITGB6P18564 788 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 PDHA2P29803 388 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 PRDX3P30048 256 aaKnown RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 SHMT2P34897 504 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 GRIA1P42261 906 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 TTPAP49638 278 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 KPNA2P52292 529 aaKnown RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 POLE2P56282 527 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 BASP1P80723 227 aaKnown RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 NFATC3Q12968 1075 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 KCNAB1Q14722 419 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 SIX1Q15475 284 aaPredicted RBP11.06□□□□□ -0.64
BEST3-209ENST00000548658 SYTL3Q4VX76 610 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 PWWP2BQ6NUJ5 590 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 TMEM126BQ8IUX1 230 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 MPP5Q8N3R9 675 aa11.06□□□□□ -0.64
BEST3-209ENST00000548658 PHC3Q8NDX5 983 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms