RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 E4F1Q66K89 784 aaPredicted RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 RHBDD2Q6NTF9 364 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 ZNF571Q7Z3V5 609 aaPredicted RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 CPNE8Q86YQ8 564 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 PQLC3Q8N755 202 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 BCORP1Q8N888 145 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 BRSK1Q8TDC3 778 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 COG1Q8WTW3 980 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 ZFPM2Q8WW38 1151 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 AGAP3Q96P47 875 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 AGAP4Q96P64 663 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 C17orf62Q9BQA9 187 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 TRIM56Q9BRZ2 755 aaKnown RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 CLSTN2Q9H4D0 955 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 DEF6Q9H4E7 631 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 HAUS2Q9NVX0 235 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 IFT80Q9P2H3 777 aaPredicted RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 NDOR1Q9UHB4 597 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 DNMT3AQ9Y6K1 912 aaPredicted RBP9.08□□□□□ -0.96
CHD4-212ENST00000545083 SCINQ9Y6U3 715 aa9.08□□□□□ -0.96
CHD4-212ENST00000545083 A0A1B0GTL3 188 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 MATN2O00339 956 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 DDX3XO00571 662 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD4-212ENST00000545083 CCL21O00585 134 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 SOCS6O14544 535 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 GAPDHSO14556 408 aaPredicted RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 KCNN4O15554 427 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 OR2B3O76000 313 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 KLHL18O94889 574 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 MT-CYBP00156 380 aaPredicted RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 GZMAP12544 262 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 SSTR2P30874 369 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 KIR3DL1P43629 444 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 IFI35P80217 286 aaPredicted RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 ADORA2A-AS1P86434 159 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 UBXN1Q04323 297 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 Q0VFX4 171 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 ZIC1Q15915 447 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 CCDC183Q5T5S1 534 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 FCRL6Q6DN72 434 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 PPP1R2P3Q6NXS1 205 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 RPUSD3Q6P087 351 aaKnown RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 FAM151BQ6UXP7 276 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 LINC00696Q6ZRV3 163 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 DET1Q7L5Y6 550 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 DAAM2Q86T65 1068 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 TRIM73Q86UV7 250 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 GPR135Q8IZ08 494 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 MMP21Q8N119 569 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHD4-212ENST00000545083 CCNYQ8ND76 341 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 DDHD1Q8NEL9 900 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 OR1N1Q8NGS0 311 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 SPATA22Q8NHS9 363 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 ENOX1Q8TC92 643 aaKnown RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 LCN9Q8WX39 176 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 NR4A3Q92570 626 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 TADA1Q96BN2 335 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 HDAC11Q96DB2 347 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 IMP4Q96G21 291 aaKnown RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 ERGIC2Q96RQ1 377 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 MESP1Q9BRJ9 268 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 SRMSQ9H3Y6 488 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 HAUS4Q9H6D7 363 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 SUCOQ9UBS9 1254 aaKnown RBP9.07□□□□□ -0.96
CHD4-212ENST00000545083 SH3BGRL2Q9UJC5 107 aa9.07□□□□□ -0.96
CHD4-212ENST00000545083 MAP1AP78559 2803 aaPredicted RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 MGAT4DA6NG13 374 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 BUD23O43709 281 aaKnown RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 SGTAO43765 313 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 WISP2O76076 250 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 NDST3O95803 873 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 POLBP06746 335 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 SLC35G4P0C7Q5 338 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 ITGAXP20702 1163 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 MMP11P24347 488 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 NDUFS1P28331 727 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 HMGCLP35914 325 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 SPAM1P38567 509 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 PBX1P40424 430 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 CA7P43166 264 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 UBE2HP62256 183 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 TMPRSS15P98073 1019 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 PIGHQ14442 188 aaPredicted RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 NKAIN1Q4KMZ8 207 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 LDLRAP1Q5SW96 308 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 KIRREL2Q6UWL6 708 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 RPTNQ6XPR3 784 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 NT5DC3Q86UY8 548 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 ADGRF3Q8IZF5 1079 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 ZNF655Q8N720 491 aaPredicted RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 NIPA2Q8N8Q9 360 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 ACVR1CQ8NER5 493 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 OR2L2Q8NH16 312 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 PROKR1Q8TCW9 393 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 MAGEB10Q96LZ2 347 aaPredicted RBP9.06□□□□□ -0.96
CHD4-212ENST00000545083 AP1M1Q9BXS5 423 aa9.06□□□□□ -0.96
CHD4-212ENST00000545083 ZCCHC2Q9C0B9 1178 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms