RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 SLA2Q9H6Q3 261 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 PELI2Q9HAT8 420 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 APOBEC3GQ9HC16 384 aaKnown RBP2.16□□□□□ -2.06
KNTC1-213ENST00000542727 INTS10Q9NVR2 710 aaKnown RBP2.16□□□□□ -2.06
KNTC1-213ENST00000542727 ADPRHL2Q9NX46 363 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 NPAP1Q9NZP6 1156 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 LARSQ9P2J5 1176 aaKnown RBP2.16□□□□□ -2.06
KNTC1-213ENST00000542727 DNAJB4Q9UDY4 337 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 SEC63Q9UGP8 760 aaKnown RBP2.16□□□□□ -2.06
KNTC1-213ENST00000542727 RPS6KA6Q9UK32 745 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 EXO1Q9UQ84 846 aaKnown RBP2.16□□□□□ -2.06
KNTC1-213ENST00000542727 TMEM184BQ9Y519 407 aaPredicted RBP2.16□□□□□ -2.06
KNTC1-213ENST00000542727 ARID2Q68CP9 1835 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 FLT1P17948 1338 aa2.16□□□□□ -2.06
KNTC1-213ENST00000542727 COL5A2P05997 1499 aaPredicted RBP2.15□□□□□ -2.06
KNTC1-213ENST00000542727 PRSS51A0A1B0GVH4 220 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 A0A1W2PPI3 338 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 A0A1W2PR77 199 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 OR6C76A6NM76 312 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 AGAP14A8MT82 685 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 H0YIN7 160 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 SH2B2O14492 632 aaPredicted RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 ADAMDEC1O15204 470 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 CLIC2O15247 247 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 IPO8O15397 1037 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 AHCYL1O43865 530 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 GPR137BO60478 399 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 AVILO75366 819 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 BEST1O76090 585 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 PRLRP16471 622 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 ZNF26P17031 533 aaPredicted RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 DNASE1P24855 282 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 EIF2DP41214 584 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 MMP15P51511 669 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RPS18P62269 152 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 MELKQ14680 651 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 KIR2DS3Q14952 304 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RAB6CQ53S08 254 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 TECRLQ5HYJ1 363 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 PLEKHS1Q5SXH7 462 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 GCNT6Q5T4J0 391 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 FAM53AQ6NSI3 398 aaPredicted RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 KLC3Q6P597 504 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RBMS3Q6XE24 437 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 LINC00346Q8IVM7 164 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 FAM114A1Q8IWE2 563 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RPAP2Q8IXW5 612 aaPredicted RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 FAM222BQ8WU58 562 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 FCAMRQ8WWV6 532 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 SMPDL3BQ92485 455 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 DAZLQ92904 295 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 SECISBP2LQ93073 1101 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 TMEM143Q96AN5 459 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 NSUN4Q96CB9 384 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 ZNF653Q96CK0 615 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 ERLEC1Q96DZ1 483 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RSRC1Q96IZ7 334 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 POM121L2Q96KW2 1035 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RBM4BQ9BQ04 359 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 FNDC11Q9BVV2 318 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 RAB6CQ9H0N0 254 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 PPIL3Q9H2H8 161 aaKnown RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 KCNK15Q9H427 330 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 OSGEPL1Q9H4B0 414 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 PDE7BQ9NP56 450 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 ECHDC1Q9NTX5 307 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 PAK5Q9P286 719 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 AMACRQ9UHK6 382 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 TMEM5Q9Y2B1 443 aa2.15□□□□□ -2.07
KNTC1-213ENST00000542727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.15□□□□□ -2.072e-12■□□□□ 8.5
KNTC1-213ENST00000542727 SPIN1Q9Y657 262 aaPredicted RBP2.15□□□□□ -2.07
KNTC1-213ENST00000542727 LNP1A1A4G5 178 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 ELOVL7A1L3X0 281 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 A6NL46 340 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 CDRT15L2A8MXV6 281 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 SLCO1B7G3V0H7 640 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 TO15178 435 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 PAPSS1O43252 624 aaPredicted RBP2.14□□□□□ -2.07
KNTC1-213ENST00000542727 XRCC3O43542 346 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 SSX4O60224 188 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 ENTPD3O75355 529 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 STARD3NLO95772 234 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 H1F0P07305 194 aaKnown RBP2.14□□□□□ -2.07
KNTC1-213ENST00000542727 VPREB1P12018 145 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 DPEP1P16444 411 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 CSRP3P50461 194 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 STAT2P52630 851 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 THOP1P52888 689 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 SLC8A3P57103 927 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 DMPKQ09013 629 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 STK4Q13043 487 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 GAGE2BQ13066 116 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 PCLAFQ15004 111 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 GAGE2EQ4V326 116 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 ZC2HC1CQ53FD0 456 aaPredicted RBP2.14□□□□□ -2.07
KNTC1-213ENST00000542727 CFAP58Q5T655 872 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 GAGE2AQ6NT46 116 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 CFAP161Q6P656 301 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 ZNF790Q6PG37 636 aa2.14□□□□□ -2.07
KNTC1-213ENST00000542727 CORO6Q6QEF8 472 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms