RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 RAB43Q86YS6 212 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 ZDHHC13Q8IUH4 622 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 LYSMD2Q8IV50 215 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 DENND6AQ8IWF6 608 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 C8orf59Q8N0T1 100 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 EID3Q8N140 333 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 SCML4Q8N228 414 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 SLC43A2Q8N370 569 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 SFRP1Q8N474 314 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 METTL13Q8N6R0 699 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 FAM181AQ8N9Y4 354 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 FANCBQ8NB91 859 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 AVL9Q8NBF6 648 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 KREMEN2Q8NCW0 462 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 IPMKQ8NFU5 416 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 OR1M1Q8NGA1 313 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PSMA8Q8TAA3 256 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 AGR3Q8TD06 166 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 ST7LQ8TDW4 575 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 ST8SIA4Q92187 359 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TFAP2CQ92754 450 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 USP13Q92995 863 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 UBE2FQ969M7 185 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TMIGD2Q96BF3 282 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TRIM43Q96BQ3 446 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PGAP3Q96FM1 320 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC120Q96HB5 630 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 ST6GAL2Q96JF0 529 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 LURAP1Q96LR2 239 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 HYLS1Q96M11 299 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 CCNL2Q96S94 520 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PLIN2Q99541 437 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 FAM118BQ9BPY3 351 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM121Q9BTD3 319 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 NTMT1Q9BV86 223 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TMEM120AQ9BXJ8 343 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 CCDC90BQ9GZT6 254 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 WNT8AQ9H1J5 351 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 KCNH6Q9H252 994 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TRABDQ9H4I3 376 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 MANSC1Q9H8J5 431 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 MYOZ1Q9NP98 299 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 EQTNQ9NQ60 294 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PAK6Q9NQU5 681 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 RASSF1Q9NS23 344 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TOPORSQ9NS56 1045 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 AGPAT5Q9NUQ2 364 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 MCUBQ9NWR8 336 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 BABAM1Q9NWV8 329 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 DPP3Q9NY33 737 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 VSX1Q9NZR4 365 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 LUZP4Q9P127 313 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PPP4R1LQ9P1A2 415 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PIM2Q9P1W9 311 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 KLQ9UEF7 1012 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 MAD2L2Q9UI95 211 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 KIF25Q9UIL4 384 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 MBD1Q9UIS9 605 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-219ENST00000542112 SERPINB13Q9UIV8 391 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TCFL5Q9UL49 500 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 CDC14AQ9UNH5 594 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 SNX6Q9UNH7 406 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 NAALADL1Q9UQQ1 740 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 MAN2B2Q9Y2E5 1009 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 RNF11Q9Y3C5 154 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 NAALAD2Q9Y3Q0 740 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 PCDHGB2Q9Y5G2 931 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 NPFFR2Q9Y5X5 522 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 TNS3Q68CZ2 1445 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 SCN4AP35499 1836 aa4.28□□□□□ -1.72
SNHG1-219ENST00000542112 ADGRA2Q96PE1 1338 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PHLPP1O60346 1717 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 TOGARAM1Q9Y4F4 1720 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 C5P01031 1676 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 PLCH1Q4KWH8 1693 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 A0A0G2JND7 137 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 A0A0X1KG70 313 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 A0A1B0GW55 424 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 BLACEA4D250 179 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GSG1L2A8MUP6 293 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 H0YAE9 185 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 H3BS24 57 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 M0R3G1 203 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SLC30A4O14863 429 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 OGTO15294 1046 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SLC31A2O15432 143 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 THAP12O43422 761 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 USP12O75317 370 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 AVILO75366 819 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MED24O75448 989 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 BANF1O75531 89 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 STX11O75558 287 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 SURF6O75683 361 aaKnown RBP4.27□□□□□ -1.73
SNHG1-219ENST00000542112 GCNT3O95395 438 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 MED26O95402 600 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 POMCP01189 267 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 IGHV2-70P01814 119 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 LCKP06239 509 aa4.27□□□□□ -1.73
SNHG1-219ENST00000542112 QDPRP09417 244 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms