RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 C5AR2Q9P296 337 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SAE1Q9UBE0 346 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 NDOR1Q9UHB4 597 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SHANK1Q9Y566 2161 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SYCE3A1L190 88 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 C2orf74A8MZ97 194 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PSTPIP1O43586 416 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LDB2O43679 373 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ANXA9O76027 345 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CRTAMO95727 393 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 CD63P08962 238 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PECAM1P16284 738 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 HNRNPH3P31942 346 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FOLR3P41439 243 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 PRPSAP1Q14558 356 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LLGL1Q15334 1064 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 TAF1AQ15573 450 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FAM69BQ5VUD6 431 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 MLIPQ5VWP3 458 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LCN10Q6JVE6 187 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SARM1Q6SZW1 724 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ZBTB2Q8N680 514 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 RBMXL3Q8N7X1 1067 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 Q8NA96 180 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 OR8K1Q8NGG5 319 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 OXNAD1Q96HP4 312 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 LINC00615Q96LM1 132 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 QKIQ96PU8 341 aaKnown RBP eCLIP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 COPS8Q99627 209 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SMAD5Q99717 465 aaKnown RBP12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 FKBPLQ9UIM3 349 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 SLC5A6Q9Y289 635 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 B3GNT3Q9Y2A9 372 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 ARL5AQ9Y689 179 aa12.59□□□□□ -0.39
TNFRSF1A-207ENST00000535958 HACD1B0YJ81 288 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GAPDHSO14556 408 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZNF749O43361 778 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CBFA2T2O43439 604 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 STK10O94804 968 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 IPO13O94829 963 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 MSL3P1P0C860 447 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 RNF224P0DH78 156 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ST6GAL1P15907 406 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CTNNA2P26232 953 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PRDX3P30048 256 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 HADHAP40939 763 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CDKN2BP42772 138 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PRLHRP49683 370 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PTPRCAPQ14761 206 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CYP2A13Q16696 494 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZRANB3Q5FWF4 1079 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZNF787Q6DD87 383 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 MRGPREQ86SM8 312 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 AMIGO1Q86WK6 493 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 NAT14Q8WUY8 206 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 HGH1Q9BTY7 390 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 KLHL25Q9H0H3 589 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GBA3Q9H227 469 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TXLNGQ9NUQ3 528 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SPTLC3Q9NUV7 552 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PTRH2Q9Y3E5 179 aaKnown RBP12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 AP1M2Q9Y6Q5 423 aa12.58□□□□□ -0.4
TNFRSF1A-207ENST00000535958 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ANKUB1A6NFN9 424 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 C5orf60A6NFR6 353 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 H7C0C1 242 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 BTN3A1O00481 513 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 KRT86O43790 486 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 OR2B3O76000 313 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 AGTP01019 485 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ATP1B2P14415 290 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 COMTP21964 271 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CA5AP35218 305 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ATP5OP48047 213 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 TMPRSS15P98073 1019 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SSPNQ14714 243 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 IRAK1BP1Q5VVH5 260 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SNX20Q7Z614 316 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 GALNT16Q8N428 558 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ZADH2Q8N4Q0 377 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 CISD2Q8N5K1 135 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 OR52E1Q8NGJ3 308 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 SNRNP40Q96DI7 357 aaKnown RBP12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 DNAJC7Q99615 494 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 PITPNM3Q9BZ71 974 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 COG4Q9H9E3 785 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 AGPAT4Q9NRZ5 378 aa12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 IFT80Q9P2H3 777 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 ERRFI1Q9UJM3 462 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF1A-207ENST00000535958 AAR2Q9Y312 384 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms