RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ITGB6P18564 788 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 CHRM3P20309 590 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 FDXRP22570 491 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 CD1CP29017 333 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 SKIV2L2P42285 1042 aaKnown RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 MAP1BP46821 2468 aaKnown RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 HSPA14Q0VDF9 509 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 GPR18Q14330 331 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 TMED2Q15363 201 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 FAM153CQ494X1 144 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 RBM20Q5T481 1227 aaKnown RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 DHRS13Q6UX07 377 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 NAPRTQ6XQN6 538 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 CCNI2Q6ZMN8 369 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 NEK10Q6ZWH5 1172 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 TRMT10CQ7L0Y3 403 aaKnown RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 TMPRSS7Q7RTY8 843 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 STRA8Q7Z7C7 330 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 TMPRSS12Q86WS5 348 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 ZBTB2Q8N680 514 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 TFGQ92734 400 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 CXorf40BQ96DE9 158 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 CCDC68Q9H2F9 335 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 LRRN3Q9H3W5 708 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 FAM8A1Q9UBU6 413 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.11□□□□□ -0.151e-7■■■□□ 15
CPSF1-206ENST00000531480 COLEC10Q9Y6Z7 277 aa14.11□□□□□ -0.15
CPSF1-206ENST00000531480 V9GYY5 206 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-206ENST00000531480 E5RI56 91 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CASC3O15234 703 aaKnown RBP14.1□□□□□ -0.15
CPSF1-206ENST00000531480 ZW10O43264 779 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 ATP8B1O43520 1251 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 VPS26AO75436 327 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 PIAS1O75925 651 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 WISP3O95389 354 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CBSLP0DN79 551 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 PHBP35232 272 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CBSP35520 551 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 GP5P40197 560 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 PDX1P52945 283 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CDKN2DP55273 166 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 OR1D5P58170 312 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CCL7P80098 99 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CFHR1Q03591 330 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 FOXC1Q12948 553 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 GPS2Q13227 327 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 SYTL3Q4VX76 610 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 HECTD2Q5U5R9 776 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 FAM45BPQ6NSW5 357 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 UNC5DQ6UXZ4 953 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 TRIM48Q8IWZ4 208 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 TBC1D21Q8IYX1 336 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 DCBLD1Q8N8Z6 715 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 OR5K2Q8NHB8 316 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 FAM45AQ8TCE6 357 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 INPP5DQ92835 1189 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 VPS39Q96JC1 886 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CYTH2Q99418 400 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 NDNQ99608 321 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 SLC38A3Q99624 504 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 GPR21Q99679 349 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 RBBP8Q99708 897 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 RAB33BQ9H082 229 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 EPB41L4BQ9H329 900 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 IMP3Q9NV31 184 aaKnown RBP14.1□□□□□ -0.15
CPSF1-206ENST00000531480 TAS2R13Q9NYV9 303 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 OGFRQ9NZT2 677 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 PDP2Q9P2J9 529 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 SLC24A2Q9UI40 661 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 VWA7Q9Y334 891 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 CFAP20Q9Y6A4 193 aaKnown RBP14.1□□□□□ -0.15
CPSF1-206ENST00000531480 ACACBO00763 2458 aa14.1□□□□□ -0.15
CPSF1-206ENST00000531480 D6RAR5 112 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 TSPAN12O95859 305 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 RPLP0P05388 317 aaKnown RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 ENO3P13929 434 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 ABCG1P45844 678 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 LIMK2P53671 638 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 VSNL1P62760 191 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 ZFP36L1Q07352 338 aaKnown RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 TTLL9Q3SXZ7 439 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 ACSBG2Q5FVE4 666 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 GRTP1Q5TC63 336 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 UGT3A1Q6NUS8 523 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 DUS1LQ6P1R4 473 aaKnown RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 WDR74Q6RFH5 385 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 CYHR1Q6ZMK1 362 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 MTERF4Q7Z6M4 381 aaKnown RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 CNPY4Q8N129 248 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 GALNT15Q8N3T1 639 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 SIDT2Q8NBJ9 832 aaKnown RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 ACVR1CQ8NER5 493 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 GRAMD1AQ96CP6 724 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 GPR22Q99680 433 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 OLFM1Q99784 485 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 DPYSL5Q9BPU6 564 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 MENTQ9BUN1 341 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 TFB2MQ9H5Q4 396 aaKnown RBP14.09□□□□□ -0.15
CPSF1-206ENST00000531480 POPDC3Q9HBV1 291 aa14.09□□□□□ -0.15
CPSF1-206ENST00000531480 KCNK4Q9NYG8 393 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms