RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	TBC1D20	Q96BZ9	403 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	LGALS12	Q96DT0	336 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ERLEC1	Q96DZ1	483 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZHX1-C8orf76	Q96EF9	292 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	RTP3	Q9BQQ7	232 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	BTBD2	Q9BX70	525 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	GABARAPL1	Q9H0R8	117 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MMP27	Q9H306	513 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PCDH12	Q9NPG4	1184 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	NLE1	Q9NVX2	485 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ERVK-18	Q9QC07	812 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	INVS	Q9Y283	1065 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TNPO3	Q9Y5L0	923 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MICAL3	Q7RTP6	2002 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PTTG1	O95997	202 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	IL6	P05231	212 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	CAPN1	P07384	714 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARHGDIA	P52565	204 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ERVPABLB-1	P60509	514 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	NCS1	P62166	190 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	VAC14	Q08AM6	782 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	DGCR6	Q14129	220 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF235	Q14590	738 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	KIAA0040	Q15053	153 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PON2	Q15165	354 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TRIP4	Q15650	581 aa	Predicted RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PARP15	Q460N3	678 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	ATG9B	Q674R7	924 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	LETMD1	Q6P1Q0	360 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	CCDC81	Q6ZN84	652 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	LYSMD2	Q8IV50	215 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	PGBD5	Q8N414	524 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR52B6	Q8NGF0	335 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	TPK1	Q9H3S4	243 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	NUDT4	Q9NZJ9	180 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	POU2F3	Q9UKI9	436 aa		10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	EIF3L	Q9Y262	564 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	RBMX2	Q9Y388	322 aa	Known RBP	10.09	□□□□□ -0.79
SPIDR-225	ENST00000524141	MN1	Q10571	1320 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	MYO16	Q9Y6X6	1858 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	FAM220BP	B1ANY3	271 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	SNPH	O15079	494 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	AXIN1	O15169	862 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	CREG1	O75629	220 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	RFPL2	O75678	378 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	SERPINF2	P08697	491 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	PRKACG	P22612	351 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	MAP2K4	P45985	399 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	GALNT3	Q14435	633 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	PTPRN	Q16849	979 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	TIGD5	Q53EQ6	642 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	DET1	Q7L5Y6	550 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ABI1	Q8IZP0	508 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	SLC7A5P1	Q8MH63	180 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	GPRC5A	Q8NFJ5	357 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	SLC16A10	Q8TF71	515 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	FCGR1B	Q92637	280 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	GAD1	Q99259	594 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ABHD16B	Q9H3Z7	469 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	PARVB	Q9HBI1	364 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ACOT13	Q9NPJ3	140 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	POLE4	Q9NR33	117 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	EXD2	Q9NVH0	621 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	KL	Q9UEF7	1012 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	A3GALT2	U3KPV4	340 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	MOXD2P	A6NHM9	499 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ZBBX	A8MT70	800 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	EFCAB9	A8MZ26	197 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	RAMP2	O60895	175 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	TSPAN12	O95859	305 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	OTC	P00480	354 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	CD6	P30203	668 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	FMO3	P31513	532 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ZNF140	P52738	457 aa	Predicted RBP	10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	FCGRT	P55899	365 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ADAM17	P78536	824 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	PCBP2	Q15366	365 aa	Known RBP eCLIP	10.08	□□□□□ -0.8	9e-7	■■■■■ 31
SPIDR-225	ENST00000524141	ZNF404	Q494X3	552 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	TMEM179B	Q7Z7N9	219 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ZNF683	Q8IZ20	524 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	CARNMT1	Q8N4J0	409 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ZNF540	Q8NDQ6	660 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	CDK15	Q96Q40	435 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	PKMYT1	Q99640	499 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	ABCB10	Q9NRK6	738 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	VPS51	Q9UID3	782 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	UTS2R	Q9UKP6	389 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	TMEM98	Q9Y2Y6	226 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	PCDHB14	Q9Y5E9	798 aa		10.08	□□□□□ -0.8
SPIDR-225	ENST00000524141	TRIP12	Q14669	1992 aa	Predicted RBP	10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	IGLV3-10	A0A075B6K4	115 aa		10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	FADS2	O95864	444 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	SERPINA1	P01009	418 aa		10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	MT-ND2	P03891	347 aa		10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	PKM	P14618	531 aa	Known RBP	10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	UGT2B10	P36537	528 aa		10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	MASP1	P48740	699 aa		10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	TTPA	P49638	278 aa		10.07	□□□□□ -0.8
SPIDR-225	ENST00000524141	HK3	P52790	923 aa		10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms