RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 AHSA2Q719I0 299 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 AADATQ8N5Z0 425 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 OR2T12Q8NG77 320 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 OR5H6Q8NGV6 325 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 CELF6Q96J87 481 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 MAP6Q96JE9 813 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 VPS35Q96QK1 796 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 CDADC1Q9BWV3 514 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 MKRN2Q9H000 416 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 RIBC2Q9H4K1 309 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 TREX1Q9NSU2 369 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 KCNN3Q9UGI6 736 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 RAPGEFL1Q9UHV5 662 aa9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 TMEFF2Q9UIK5 374 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-230ENST00000521724 LOC100506127A0A0U1RQW1 187 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 A0A1B0GTL3 188 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 A0A1W2PQ72 361 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 C19orf81C9J6K1 198 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 CDK2AP1O14519 115 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 SNX4O95219 450 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 HOXD8P13378 290 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PFKLP17858 780 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 HUNKP57058 714 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 CXCR4P61073 352 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 TRIM71Q2Q1W2 868 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 ZC3H12BQ5HYM0 836 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 LAIR1Q6GTX8 287 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 SCIMPQ6UWF3 145 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 DET1Q7L5Y6 550 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 NOXA1Q86UR1 476 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PIM3Q86V86 326 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 RAB43Q86YS6 212 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 TRPM4Q8TD43 1214 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 WNT8BQ93098 351 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PABPC5Q96DU9 382 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 NPY6RQ99463 290 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 GORASP2Q9H8Y8 452 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 SEMA4BQ9NPR2 832 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PDGFCQ9NRA1 345 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 ERVK13-1Q9NX77 482 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 RNF6Q9Y252 685 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 GRIP1Q9Y3R0 1128 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PEX16Q9Y5Y5 336 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 DNAH12Q6ZR08 3092 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 POLR2AP24928 1970 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 FAM234BA2RU67 622 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 CCDC85CA6NKD9 419 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 LOC110117498-PIK3R3F6TDL0 507 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 DSCR3O14972 297 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 TMCC2O75069 709 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PMPCBO75439 489 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 ANXA9O76027 345 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 DNTTP04053 509 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 ITGAMP11215 1152 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 GADD45AP24522 165 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 SLC26A3P40879 764 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 CTSKP43235 329 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 CHRNA4P43681 627 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 CDKN2DP55273 166 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 GPR50Q13585 617 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 SLC14A2Q15849 920 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 FAM214AQ32MH5 1076 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 Q5BKY6 102 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 DLEU7Q6UYE1 221 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 LBX2Q6XYB7 198 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 FAM126BQ8IXS8 530 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 OR8H2Q8N162 312 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 PROKR1Q8TCW9 393 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 FAM162AQ96A26 154 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 ZNF583Q96ND8 569 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 WDR6Q9NNW5 1121 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 GMPPBQ9Y5P6 360 aa9.45□□□□□ -0.9
CTNNA1-230ENST00000521724 DICER1Q9UPY3 1922 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 C12orf71A8MTZ7 269 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 TFECO14948 347 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 POLR1CO15160 346 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 CAPN5O15484 640 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 FKBP9O95302 570 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 STAU1O95793 577 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 CYP2A7P20853 494 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 HMGB2P26583 209 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 PPP3CCP48454 512 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 FBXO48Q5FWF7 155 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 INTS6LQ5JSJ4 861 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 DCAF15Q66K64 600 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 CCSAPQ6IQ19 270 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 LDB1Q86U70 411 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 HIPK1Q86Z02 1210 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 FBXO16Q8IX29 292 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 RGL4Q8IZJ4 473 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 FAM109AQ8N4B1 249 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 FNDC5Q8NAU1 212 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 OR10A6Q8NH74 314 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 SLC2A14Q8TDB8 520 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 FAM167AQ96KS9 214 aa9.44□□□□□ -0.9
CTNNA1-230ENST00000521724 NEDD4LQ96PU5 975 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms