RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ATXN7L1Q9ULK2 861 aaPredicted RBP24.49■■□□□ 1.51
LSM6-202ENST00000502781 MSRB2Q9Y3D2 182 aa24.49■■□□□ 1.51
LSM6-202ENST00000502781 FAM149AA5PLN7 773 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 FAM159BA6NKW6 160 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 CD9P21926 228 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 ATP5DP30049 168 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 CSF2RBP32927 897 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 CSE1LP55060 971 aaKnown RBP24.48■■□□□ 1.51
LSM6-202ENST00000502781 TIAL1Q01085 375 aaKnown RBP eCLIP24.48■■□□□ 1.51
LSM6-202ENST00000502781 CAMK2BQ13554 666 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 MARCH9Q86YJ5 346 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 SLITRK4Q8IW52 837 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 ZBTB2Q8N680 514 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 GIMAP7Q8NHV1 300 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 FAM136AQ96C01 138 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 GRAMD1AQ96CP6 724 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 SLC30A3Q99726 388 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 NUDT22Q9BRQ3 303 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 SYNDIG1Q9H7V2 258 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 NSMCE4AQ9NXX6 385 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 ANGPTL2Q9UKU9 493 aa24.48■■□□□ 1.51
LSM6-202ENST00000502781 CORO1CQ9ULV4 474 aaPredicted RBP24.48■■□□□ 1.51
LSM6-202ENST00000502781 E5RI56 91 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 DUX1O43812 170 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 ZFP36L1Q07352 338 aaKnown RBP24.47■■□□□ 1.51
LSM6-202ENST00000502781 ZNF574Q6ZN55 896 aaPredicted RBP24.47■■□□□ 1.51
LSM6-202ENST00000502781 USP53Q70EK8 1073 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 PIM3Q86V86 326 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 DPYSL5Q9BPU6 564 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 PDP2Q9P2J9 529 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 NFU1Q9UMS0 254 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 DHRS7Q9Y394 339 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 ENTPD2Q9Y5L3 495 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 CEP295Q9C0D2 2601 aa24.47■■□□□ 1.51
LSM6-202ENST00000502781 CXorf49A8MYA2 514 aaPredicted RBP24.46■■□□□ 1.51
LSM6-202ENST00000502781 CSO75390 466 aaKnown RBP24.46■■□□□ 1.51
LSM6-202ENST00000502781 UBXN7O94888 489 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 CCKBRP32239 447 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 ABCG1P45844 678 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 KYNUQ16719 465 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 TEX35Q5T0J7 233 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 RBM20Q5T481 1227 aaKnown RBP24.46■■□□□ 1.51
LSM6-202ENST00000502781 WDR74Q6RFH5 385 aaPredicted RBP24.46■■□□□ 1.51
LSM6-202ENST00000502781 B3GNT8Q7Z7M8 397 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 ZC3HC1Q86WB0 502 aaKnown RBP24.46■■□□□ 1.51
LSM6-202ENST00000502781 TBC1D21Q8IYX1 336 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 PHC3Q8NDX5 983 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 ACVR1CQ8NER5 493 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 OR5K2Q8NHB8 316 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 CD200R1Q8TD46 325 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 CDKL2Q92772 493 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 FERD3LQ96RJ6 166 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 NDNQ99608 321 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 NINJ2Q9NZG7 142 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 ASF1AQ9Y294 204 aa24.46■■□□□ 1.51
LSM6-202ENST00000502781 PIAS1O75925 651 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 HOXB3P14651 431 aaPredicted RBP24.45■■□□□ 1.5
LSM6-202ENST00000502781 MAP9Q49MG5 647 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 TMEM71Q6P5X7 295 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 UNC5DQ6UXZ4 953 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 STRA8Q7Z7C7 330 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 EIF1ADQ8N9N8 165 aaKnown RBP24.45■■□□□ 1.5
LSM6-202ENST00000502781 SIDT2Q8NBJ9 832 aaKnown RBP24.45■■□□□ 1.5
LSM6-202ENST00000502781 OR4D9Q8NGE8 314 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 OR5AR1Q8NGP9 310 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 AHCYL2Q96HN2 611 aaKnown RBP24.45■■□□□ 1.5
LSM6-202ENST00000502781 TMEM74Q96NL1 305 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 GPR21Q99679 349 aa24.45■■□□□ 1.5
LSM6-202ENST00000502781 VPS26AO75436 327 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 PROS1P07225 676 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 STX2P32856 288 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 CAPZBP47756 277 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 KRT33BQ14525 404 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 ACSBG2Q5FVE4 666 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 FBF1Q8TES7 1133 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 RSC1A1Q92681 617 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 INPP5DQ92835 1189 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 RAB33BQ9H082 229 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 CDC42EP4Q9H3Q1 356 aaKnown RBP24.44■■□□□ 1.5
LSM6-202ENST00000502781 TFB2MQ9H5Q4 396 aaKnown RBP24.44■■□□□ 1.5
LSM6-202ENST00000502781 TAS2R13Q9NYV9 303 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 EPHA6Q9UF33 1036 aa24.44■■□□□ 1.5
LSM6-202ENST00000502781 MN1Q10571 1320 aaPredicted RBP24.44■■□□□ 1.5
LSM6-202ENST00000502781 MATN4O95460 622 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 C9P02748 559 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 TYRP1P17643 537 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 SKIV2L2P42285 1042 aaKnown RBP24.43■■□□□ 1.5
LSM6-202ENST00000502781 LIMK2P53671 638 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 INHBCP55103 352 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 CDKN2DP55273 166 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 ILF2Q12905 390 aaKnown RBP24.43■■□□□ 1.5
LSM6-202ENST00000502781 TTLL9Q3SXZ7 439 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 KBTBD12Q3ZCT8 623 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 NEK10Q6ZWH5 1172 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 OR52E1Q8NGJ3 308 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 JPH3Q8WXH2 748 aaPredicted RBP24.43■■□□□ 1.5
LSM6-202ENST00000502781 NCSTNQ92542 709 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 CPNE1Q99829 537 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 HGH1Q9BTY7 390 aa24.43■■□□□ 1.5
LSM6-202ENST00000502781 FUT8Q9BYC5 575 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms