RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	SPATA6L	Q8N4H0	392 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	BANP	Q8N9N5	519 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	TCEAL3	Q969E4	200 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	RMDN2	Q96LZ7	410 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	GPR78	Q96P69	363 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	PAIP2	Q9BPZ3	127 aa	Known RBP	13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	WWP1	Q9H0M0	922 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	GAREM1	Q9H706	876 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	IL21R	Q9HBE5	538 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	PRDM8	Q9NQV8	689 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	ZNF358	Q9NW07	568 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	MKS1	Q9NXB0	559 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	FAM53C	Q9NYF3	392 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	TAAR2	Q9P1P5	351 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	IKZF3	Q9UKT9	509 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	PSMD13	Q9UNM6	376 aa		13.65	□□□□□ -0.22
ATPAF2-208	ENST00000496852	MATN4	O95460	622 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CER1	O95813	267 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GSTA1	P08263	222 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC35G4	P0C7Q5	338 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ZNF806	P0C7X5	589 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ENG	P17813	658 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	EPHA8	P29322	1005 aa	Predicted RBP	13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GYS2	P54840	703 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ATP6V0D1	P61421	351 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	UAP1L1	Q3KQV9	507 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CDHR3	Q6ZTQ4	885 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KANSL1	Q7Z3B3	1105 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TAX1BP1	Q86VP1	789 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	LCA5	Q86VQ0	697 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GKN2	Q86XP6	184 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RASGRP3	Q8IV61	690 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SLC25A45	Q8N413	288 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ARFGAP2	Q8N6H7	521 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ALKBH8	Q96BT7	664 aa	Known RBP	13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	APOPT1	Q96IL0	206 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	UNK	Q9C0B0	810 aa	Known RBP	13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NMRAL1	Q9HBL8	299 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SSU72	Q9NP77	194 aa	Known RBP	13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	UCKL1	Q9NWZ5	548 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NKIRAS1	Q9NYS0	192 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	DCDC2	Q9UHG0	476 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TSR3	Q9UJK0	312 aa	Known RBP	13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CSNK1G3	Q9Y6M4	447 aa		13.64	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TMEM120B	A0PK00	339 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PDZK1P1	A8MUH7	402 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	LMO7DN	F2Z398	122 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	YY2	O15391	372 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	YKT6	O15498	198 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ZBTB14	O43829	449 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TYROBP	O43914	113 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SNX2	O60749	519 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GLRA3	O75311	464 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	LMNA	P02545	664 aa	Known RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GIMD1	P0DJR0	217 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	F3	P13726	295 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CRHR1	P34998	444 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CCT5	P48643	541 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CLCA4	Q14CN2	919 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	FAM83E	Q2M2I3	478 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TSNAXIP1	Q2TAA8	658 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	LVRN	Q6Q4G3	990 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ISCA2	Q86U28	154 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CCDC63	Q8NA47	563 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	OR2I1P	Q8NGU4	316 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MDM1	Q8TC05	714 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SAP25	Q8TEE9	199 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PTER	Q96BW5	349 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	INSM2	Q96T92	566 aa	Predicted RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	MLXIPL	Q9NP71	852 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RUVBL2	Q9Y230	463 aa	Known RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ASCC3	Q8N3C0	2202 aa	Known RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SNRNP200	O75643	2136 aa	Known RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	LNP1	A1A4G5	178 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	GFY	I3L273	518 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CDC7	O00311	574 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	BTN3A1	O00481	513 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PSIP1	O75475	530 aa	Known RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	CCT8	P50990	548 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	IL9R	Q01113	521 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ABR	Q12979	859 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ACAP2	Q15057	778 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SBSN	Q6UWP8	590 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	UNC5D	Q6UXZ4	953 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NAGS	Q8N159	534 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ASB11	Q8WXH4	323 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	KIAA1191	Q96A73	305 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	SCYL1	Q96KG9	808 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TFB2M	Q9H5Q4	396 aa	Known RBP	13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TMEM216	Q9P0N5	145 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ADAMTS6	Q9UKP5	1117 aa		13.63	□□□□□ -0.23
ATPAF2-208	ENST00000496852	COL5A1	P20908	1838 aa	Predicted RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	NPEPPSL1	A6NEC2	478 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	PROB1	E7EW31	1015 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	IFRD1	O00458	451 aa	Predicted RBP	13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	ANXA6	P08133	673 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	TFEB	P19484	476 aa		13.62	□□□□□ -0.23
ATPAF2-208	ENST00000496852	RPA3	P35244	121 aa	Predicted RBP	13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms