RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TMEM74Q96NL1 305 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 MCCC1Q96RQ3 725 aaPredicted RBP10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ZDHHC6Q9H6R6 413 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 KLQ9UEF7 1012 aa10.87□□□□□ -0.67
CMSS1-208ENST00000496116 ZFC3H1O60293 1989 aaKnown RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 TCRBV5S2A0A599 114 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 ANKRD28O15084 1053 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 GMNNO75496 209 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 KCNH1O95259 989 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 H6PDO95479 791 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 C7P10643 843 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 GJA1P17302 382 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 AKT1P31749 480 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 GNPDA1P46926 289 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 RPIAP49247 311 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 CCT8P50990 548 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 NR1H2P55055 460 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 POLR2LP62875 67 aaKnown RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 PTSQ03393 145 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 PWP1Q13610 501 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 APOFQ13790 326 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 MAP7Q14244 749 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 FXNQ16595 210 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 CARD16Q5EG05 197 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 ISLR2Q6UXK2 745 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 ADGRG2Q8IZP9 1017 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 TCAIMQ8N3R3 496 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 CBR4Q8N4T8 237 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 ZNF557Q8N988 423 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 KREMEN2Q8NCW0 462 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 PAPD5Q8NDF8 572 aaKnown RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 OR8J3Q8NGG0 315 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 DIS3LQ8TF46 1054 aaKnown RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 LMLNQ96KR4 655 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 NSMCE2Q96MF7 247 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 CGREF1Q99674 301 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 SLC46A2Q9BY10 475 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 ACTL8Q9H568 366 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 ZNF490Q9ULM2 529 aaPredicted RBP10.86□□□□□ -0.67
CMSS1-208ENST00000496116 MYRFQ9Y2G1 1151 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 CCL27Q9Y4X3 112 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 PCDHB3Q9Y5E6 796 aa10.86□□□□□ -0.67
CMSS1-208ENST00000496116 EME2A4GXA9 379 aaPredicted RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 FAM149AA5PLN7 773 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 FFAR3O14843 346 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 GPR42O15529 346 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 ARHGEF15O94989 841 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 CLDN9O95484 217 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 KRT6AP02538 564 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 KRT6BP04259 564 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 HIST1H2AGP0C0S8 130 aaPredicted RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 BMP1P13497 986 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 CSF2RAP15509 400 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 NCK1P16333 377 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 HIST1H2ADP20671 130 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 KRT6CP48668 564 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 ATP6AP1Q15904 470 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SLC5A9Q2M3M2 681 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 ATP13A5Q4VNC0 1218 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 GLYATQ6IB77 296 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 LILRA6Q6PI73 481 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 DLEU7Q6UYE1 221 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 TRIM46Q7Z4K8 759 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 FAM110BQ8TC76 370 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SLC13A3Q8WWT9 602 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 TFAP2CQ92754 450 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 RMND5BQ96G75 393 aaPredicted RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 HIST1H2AHQ96KK5 128 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 PPM1MQ96MI6 270 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 HIST1H2AJQ99878 128 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 H2AFJQ9BTM1 129 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SLC29A3Q9BZD2 475 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 DPY30Q9C005 99 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SLC32A1Q9H598 525 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 DUS2Q9NX74 493 aaKnown RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 ARL15Q9NXU5 204 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 RNF11Q9Y3C5 154 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 HELZP42694 1942 aaKnown RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 ARHGAP10A1A4S6 786 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 LOC730098B7Z3J9 87 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SEC22BO75396 215 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 RASAL1O95294 804 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 CXCL14O95715 111 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 IL6P05231 212 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 UGT2B4P06133 528 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 C8GP07360 202 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SEMG2Q02383 582 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 NADK2Q4G0N4 442 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 DPY19L3Q6ZPD9 716 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 TNIP2Q8NFZ5 429 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 TSPAN14Q8NG11 270 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 OSCP1Q8WVF1 389 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 BDH2Q9BUT1 245 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 RPF2Q9H7B2 306 aaKnown RBP10.85□□□□□ -0.67
CMSS1-208ENST00000496116 ACTR8Q9H981 624 aa10.85□□□□□ -0.67
CMSS1-208ENST00000496116 LRTM1Q9HBL6 345 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms