RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RHOT2Q8IXI1 618 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 KBTBD2Q8IY47 623 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CARFQ8N187 725 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 FAM109AQ8N4B1 249 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 METTL25Q8N6Q8 603 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 SLC4A11Q8NBS3 891 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ZNF248Q8NDW4 579 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 OR2T3Q8NH03 318 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 WDR60Q8WVS4 1066 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 FAM168AQ92567 244 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 PRCCQ92733 491 aaPredicted RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 IGSF8Q969P0 613 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 FAM131CQ96AQ9 280 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 BIRC7Q96CA5 298 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 SIPA1Q96FS4 1042 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 VCPIP1Q96JH7 1222 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 SIGLEC10Q96LC7 697 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 HAPLN3Q96S86 360 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CPPED1Q9BRF8 314 aaPredicted RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 PTDSS2Q9BVG9 487 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ITPAQ9BY32 194 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 DUSP16Q9BY84 665 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ULBP1Q9BZM6 244 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 LHX5Q9H2C1 402 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 UPF2Q9HAU5 1272 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 BRF2Q9HAW0 419 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 CYP3A43Q9HB55 503 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ASCL3Q9NQ33 180 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 EXOC1Q9NV70 894 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 ELOVL2Q9NXB9 296 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 EIF2B4Q9UI10 523 aaKnown RBP4.31□□□□□ -1.72
VPS52-222ENST00000495981 PCDHA7Q9UN72 937 aa4.31□□□□□ -1.72
VPS52-222ENST00000495981 A0A1W2PR77 199 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 A1L4Q6 167 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 YJEFN3A6XGL0 299 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 E7ENQ6 273 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 O00370 1275 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 IKBKBO14920 756 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 XPO1O14980 1071 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 P4HA2O15460 535 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 LATS1O95835 1130 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ERBB2P04626 1255 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 WNT1P04628 370 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 HMBSP08397 361 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PRF1P14222 555 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CHMP24386 653 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 EPHA8P29322 1005 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 PPIFP30405 207 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 CD70P32970 193 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PSMC2P35998 433 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 DCTP40126 519 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PBX1P40424 430 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 MXI1P50539 228 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 VAMP7P51809 220 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 METAP1P53582 386 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 TERF1P54274 439 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ADPRHP54922 357 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 NAP1L1P55209 391 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 PPP2CBP62714 309 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PPP2CAP67775 309 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ZBED6P86452 979 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ADIGQ0VDE8 80 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 KCNJ12Q14500 433 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ACOX1Q15067 660 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 TBCEQ15813 527 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 SGSM1Q2NKQ1 1148 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CBWD6Q4V339 395 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CBWD3Q5JTY5 395 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CBWD5Q5RIA9 395 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 RGS7BPQ6MZT1 257 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 IL27RAQ6UWB1 636 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 KDM7AQ6ZMT4 941 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 INTS8Q75QN2 995 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 TADA2BQ86TJ2 420 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 FAM124AQ86V42 546 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ARMC8Q8IUR7 673 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 ELOA2Q8IYF1 753 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 SPARTQ8N0X7 666 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 SCML4Q8N228 414 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 AADATQ8N5Z0 425 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 FAM71DQ8N9W8 422 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 SLC2A12Q8TD20 617 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 WFIKKN2Q8TEU8 576 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 KCNE4Q8WWG9 221 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 SNX19Q92543 992 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 NDRG1Q92597 394 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 EEF2KMTQ96G04 330 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PAGE5Q96GU1 130 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PRR11Q96HE9 360 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 APOPT1Q96IL0 206 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 HIST1H2AAQ96QV6 131 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CDK5RAP1Q96SZ6 601 aaKnown RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 ZSWIM1Q9BR11 485 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 SLC2A11Q9BYW1 496 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 CIPCQ9C0C6 399 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 RSPH9Q9H1X1 276 aaPredicted RBP4.3□□□□□ -1.72
VPS52-222ENST00000495981 CCDC68Q9H2F9 335 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 GOLPH3LQ9H4A5 285 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 EBF2Q9HAK2 575 aa4.3□□□□□ -1.72
VPS52-222ENST00000495981 PRSS16Q9NQE7 514 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms