RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 ADARP55265 1226 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SQSTM1Q13501 440 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TTLL9Q3SXZ7 439 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MSS51Q4VC12 460 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TMEM164Q5U3C3 297 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 DUPD1Q68J44 220 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CAPRIN2Q6IMN6 1127 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TTC23LQ6PF05 361 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CCDC25Q86WR0 208 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 FAM129CQ86XR2 697 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SLITRK4Q8IW52 837 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 DENND6AQ8IWF6 608 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PALM2Q8IXS6 379 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 AGBL5Q8NDL9 886 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 RCBTB1Q8NDN9 531 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ACVR1CQ8NER5 493 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CFAP61Q8NHU2 1237 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PYROXD1Q8WU10 500 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 LCN9Q8WX39 176 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 JPH3Q8WXH2 748 aaPredicted RBP11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 LPGAT1Q92604 370 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 FAM136AQ96C01 138 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TGM7Q96PF1 710 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 P2RY12Q9H244 342 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SRMSQ9H3Y6 488 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 KIR3DX1Q9H7L2 352 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SAYSD1Q9NPB0 183 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 THSD1Q9NS62 852 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 WDR70Q9NW82 654 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PISDQ9UG56 409 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 POLG2Q9UHN1 485 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SLC24A2Q9UI40 661 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 FBXO5Q9UKT4 447 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TDRKHQ9Y2W6 561 aaKnown RBP11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 COMMD10Q9Y6G5 202 aa11.44□□□□□ -0.58
CDK5RAP2-217ENST00000484546 APC2O95996 2303 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SLC5A10A0PJK1 596 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PMS2P1A4D2B8 440 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TAF4O00268 1085 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MATN2O00339 956 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 EIF3HO15372 352 aaKnown RBP eCLIP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CAPN5O15484 640 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 NIPSNAP2O75323 286 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TNFSF15O95150 251 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 THRAP10827 490 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 HOXB3P14651 431 aaPredicted RBP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CARSP49589 748 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ARL4DP49703 201 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MAPK10P53779 464 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MPP1Q00013 466 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SLC7A5Q01650 507 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 GUCY2DQ02846 1103 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ZFP36L1Q07352 338 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PRKG2Q13237 762 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 KIF26BQ2KJY2 2108 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CTSL3PQ5NE16 218 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PLEKHS1Q5SXH7 462 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 UGT3A1Q6NUS8 523 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 UNC5AQ6ZN44 842 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CAPN12Q6ZSI9 719 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TMPRSS9Q7Z410 1059 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TBC1D21Q8IYX1 336 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SLC22A15Q8IZD6 547 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 AGGF1Q8N302 714 aaeCLIP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ZBTB2Q8N680 514 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PHC3Q8NDX5 983 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 LKAAEAR1Q8TD35 194 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 RSC1A1Q92681 617 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 LRRC1Q9BTT6 524 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 HRASLS2Q9NWW9 162 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TMEM9Q9P0T7 183 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ZFATQ9P243 1243 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MTRF1LQ9UGC7 380 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TSR3Q9UJK0 312 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 PCDHGA8Q9Y5G5 932 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 TEX264Q9Y6I9 313 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 FREM2Q5SZK8 3169 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 UNC13CQ8NB66 2214 aa11.43□□□□□ -0.58
CDK5RAP2-217ENST00000484546 WDFY3Q8IZQ1 3526 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 GSAPA4D1B5 854 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 OR6C74A6NCV1 312 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MAP3K7O43318 606 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 VPS26AO75436 327 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 S1PR4O95977 384 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ITGA2BP08514 1039 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 HGFP14210 728 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 AOAHP28039 575 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 SHMT2P34897 504 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 MLLT3P42568 568 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ABRQ12979 859 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CACHD1Q5VU97 1274 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 XKR5Q6UX68 686 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 ZNF574Q6ZN55 896 aaPredicted RBP11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 FAM92BQ6ZTR7 304 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 KIAA0408Q6ZU52 694 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 CEP128Q6ZU80 1094 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 IGDCC3Q8IVU1 814 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 UNC5BQ8IZJ1 945 aa11.42□□□□□ -0.58
CDK5RAP2-217ENST00000484546 OR4E2Q8NGC2 313 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms