RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 NTRK2Q16620 822 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 GSTA3Q16772 222 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 MYLK3Q32MK0 819 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 PARP10Q53GL7 1025 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 GARNL3Q5VVW2 1013 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 IYDQ6PHW0 289 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 PLXDC2Q6UX71 529 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 FAM47EQ6ZV65 393 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 BTN2A1Q7KYR7 527 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 CHST3Q7LGC8 479 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 ATG9AQ7Z3C6 839 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 ADGRF2Q8IZF7 708 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 LYG1Q8N1E2 194 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 C10orf53Q8N6V4 93 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 OR14L1PQ8NHC6 308 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 TAF4BQ92750 862 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 SECISBP2LQ93073 1101 aaKnown RBP2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 SNX21Q969T3 373 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 LINC00479Q96M42 142 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 PIP5K1AQ99755 562 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 BRF2Q9HAW0 419 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 GIMAP4Q9NUV9 329 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 HPF1Q9NWY4 346 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 TAB2Q9NYJ8 693 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 MRPL15Q9P015 296 aaKnown RBP2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 MTF2Q9Y483 593 aaPredicted RBP2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 A6NL46 340 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 MYO1GB0I1T2 1018 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 M0QZ24 198 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 DDX39AO00148 427 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 RTCAO00442 366 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 CLIC2O15247 247 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 KCNN4O15554 427 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ARHGEF9O43307 516 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 SYNCRIPO60506 623 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 TBX10O75333 385 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 PDE9AO76083 593 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ATP5BP06576 529 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 EEF2P13639 858 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 UGT1A1P22309 533 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 HOXA13P31271 388 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 HPDP32754 393 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ICAM3P32942 547 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 CAPZA2P47755 286 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 MLLT10P55197 1068 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 PPARDQ03181 441 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 GOLGA8DPQ0D2H9 430 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 TMEM115Q12893 351 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 MAD2L1Q13257 205 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 CDC73Q6P1J9 531 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ALKBH5Q6P6C2 394 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 NCEH1Q6PIU2 408 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 SUSD1Q6UWL2 747 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 NLRP14Q86W24 1093 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 SPAG16Q8N0X2 631 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 C17orf53Q8N3J3 647 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 N4BP2L2Q92802 583 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 SMARCE1Q969G3 411 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 RMDN1Q96DB5 314 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 OXNAD1Q96HP4 312 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ABHD8Q96I13 439 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 SMC6Q96SB8 1091 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 OPRPNQ99935 248 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 DESI2Q9BSY9 194 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 MRPL1Q9BYD6 325 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 UBXN6Q9BZV1 441 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 RAD21L1Q9H4I0 556 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 COPS7BQ9H9Q2 264 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 FGF22Q9HCT0 170 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 LTB4R2Q9NPC1 389 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 UBA2Q9UBT2 640 aaPredicted RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 LIMA1Q9UHB6 759 aaKnown RBP2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ANAPC5Q9UJX4 755 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ATP6V0A2Q9Y487 856 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 FAM169AQ9Y6X4 670 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 SYNRGQ9UMZ2 1314 aa2.81□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF644Q9H582 1327 aaPredicted RBP2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 SYNJ2BP-COX16A0A087WUM0 186 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 A0A0G2JNG1 304 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 A0A0J9YWU9 116 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 FAM237AA0A1B0GTK4 181 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 FAM237BA0A1B0GVD1 139 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 GLOD5A6NK44 160 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 LIPT2A6NK58 231 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 EIF3CLB5ME19 914 aaKnown RBP2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 WISP2O76076 250 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 SORBS2O94875 1100 aaKnown RBP2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 KCNK5O95279 499 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 IGHDP01880 384 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 IL10P22301 178 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 NR2F2P24468 414 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 GCH1P30793 250 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 HOXC9P31274 260 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 PPARGP37231 505 aaPredicted RBP2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 GP5P40197 560 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 PIP4K2AP48426 406 aaPredicted RBP2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 NR2C2P49116 596 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 UBXN2AP68543 259 aa2.8□□□□□ -1.96
LAPTM4A-202ENST00000483117 OLR1P78380 273 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms