RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, human

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-208	ENST00000480340	BCL2A1	Q16548	175 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	CDKN3	Q16667	212 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	C6orf10	Q5SRN2	563 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TPRG1	Q6ZUI0	275 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	CACUL1	Q86Y37	369 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	OR4L1	Q8NH43	312 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	CALML6	Q8TD86	181 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	LRIG1	Q96JA1	1093 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	FAM129B	Q96TA1	746 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	NEURL2	Q9BR09	285 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	ANKRD60	Q9BZ19	345 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	PAIP1	Q9H074	479 aa	Known RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	CLK4	Q9HAZ1	481 aa	Known RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	PRSS16	Q9NQE7	514 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	SUCO	Q9UBS9	1254 aa	Known RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	B4GALT6	Q9UBX8	382 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	FAM32A	Q9Y421	112 aa	Known RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TRIO	O75962	3097 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	C16orf96	A6NNT2	1141 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF839	A8K0R7	811 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340		H0YJX3	145 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	SLC22A2	O15244	555 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	DLX3	O60479	287 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	BMP10	O95393	424 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	PRNP	P04156	253 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TIMP2	P16035	220 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	LHCGR	P22888	699 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	XPA	P23025	273 aa	Predicted RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TNFRSF4	P43489	277 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	KIR2DL1	P43626	348 aa	Predicted RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF789	Q5FWF6	425 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	LRRC66	Q68CR7	880 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	LAYN	Q6UX15	382 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	RALGPS2	Q86X27	583 aa	Predicted RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	MMAA	Q8IVH4	418 aa	Known RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	SCYL1	Q96KG9	808 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	SLC39A3	Q9BRY0	314 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TNFRSF12A	Q9NP84	129 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TRPV5	Q9NQA5	729 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	CATSPERZ	Q9NTU4	200 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	NSMCE4A	Q9NXX6	385 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	SUN2	Q9UH99	717 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	PPIL1	Q9Y3C6	166 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340		A0A1W2PQ67	120 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PLK4	O00444	970 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CD3EAP	O15446	510 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CLIC3	O95833	236 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	MC4R	P32245	332 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CSRP3	P50461	194 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CSE1L	P55060	971 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PRKCQ	Q04759	706 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	LRP8	Q14114	963 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	SEMA3A	Q14563	771 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	XKR5	Q6UX68	686 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	RPS27L	Q71UM5	84 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PARS2	Q7L3T8	475 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	GPR141	Q7Z602	305 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CILP2	Q8IUL8	1156 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CENPL	Q8N0S6	344 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	FSTL5	Q8N475	847 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	DNASE1L2	Q92874	299 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	LYSMD1	Q96S90	227 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	NAA50	Q9GZZ1	169 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PCDH12	Q9NPG4	1184 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	DOCK9	Q9BZ29	2069 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PIKFYVE	Q9Y2I7	2098 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	TCRBV3S1	A0A5B6	114 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	SAC3D1	A6NKF1	404 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	UPK3BL1	B0FP48	263 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	TARM1	B6A8C7	271 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	UPK3BL2	E5RIL1	263 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	H2AFY	O75367	372 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	SEC24D	O94855	1032 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	FUCA1	P04066	466 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	GSTT2	P0CG29	244 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	GSTT2B	P0CG30	244 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CD72	P21854	359 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	HADHA	P40939	763 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	TMED10	P49755	219 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CDKN1C	P49918	316 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PPP1R3A	Q16821	1122 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	MAP7D1	Q3KQU3	841 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	OGFOD2	Q6N063	350 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CNST	Q6PJW8	725 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZBTB49	Q6ZSB9	765 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZC3HC1	Q86WB0	502 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF786	Q8N393	782 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	CCNYL1	Q8N7R7	359 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	DDHD1	Q8NEL9	900 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	SREK1	Q8WXA9	508 aa	Known RBP	13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	TFAP2C	Q92754	450 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	PBXIP1	Q96AQ6	731 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	ARRDC3	Q96B67	414 aa		13.87	□□□□□ -0.19
DENND4B-208	ENST00000480340	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms