RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 GYS2P54840 703 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 DNAJC3Q13217 504 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 OR4D1Q15615 310 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TSNQ15631 228 aaKnown RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 DUOXA1Q1HG43 343 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 FAM83EQ2M2I3 478 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 DEFB133Q30KQ1 61 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 HLA-BQ31612 363 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TNFAIP8L3Q5GJ75 292 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 AGBL2Q5U5Z8 902 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 METRNLQ641Q3 311 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 IQCHQ86VS3 1027 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 NRROSQ86YC3 692 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 DCP2Q8IU60 420 aaKnown RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 MYO1HQ8N1T3 1032 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 FSTL5Q8N475 847 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 BANPQ8N9N5 519 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 PLPP7Q8NBV4 271 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 HM13Q8TCT9 377 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 PTERQ96BW5 349 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TLCD1Q96CP7 247 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 MOCOSQ96EN8 888 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 SCARF2Q96GP6 870 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 APOPT1Q96IL0 206 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 UBXN10Q96LJ8 280 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 GAREM1Q9H706 876 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 GPR27Q9NS67 375 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 ABCF3Q9NUQ8 709 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 SCHIP1Q9P0W5 487 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 DGKBQ9Y6T7 804 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 GPR179Q6PRD1 2367 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 C17orf113A0A1B0GUU1 675 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 NEMP2A6NFY4 417 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 HMGB1P1B2RPK0 211 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 B4DGG1 531 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TOR1BO14657 336 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 LIN7AO14910 233 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 KPNA5O15131 536 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 GPC4O75487 556 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 SLCO2B1O94956 709 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 MYF5P13349 255 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 NME1P15531 152 aaKnown RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 CD1DP15813 335 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 CTSKP43235 329 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 BLKP51451 505 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 SLC18A2Q05940 514 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 KRT33BQ14525 404 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 CLCA4Q14CN2 919 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 PHKG1Q16816 387 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 CCSMST1Q4G0I0 132 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 PLEKHS1Q5SXH7 462 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 AGAP9Q5VTM2 703 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 CYHR1Q6ZMK1 362 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 MBOAT1Q6ZNC8 495 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TAX1BP1Q86VP1 789 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 NKAPQ8N5F7 415 aaKnown RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 C2orf73Q8N5S3 287 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 ARMC2Q8NEN0 867 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 JPH3Q8WXH2 748 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 DLG3Q92796 817 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 ISL2Q96A47 359 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 ESAMQ96AP7 390 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 LINC00615Q96LM1 132 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 C12orf66Q96MD2 445 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 GPR78Q96P69 363 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 ELF4Q99607 663 aaPredicted RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 TIMM29Q9BSF4 260 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 NMRAL1Q9HBL8 299 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 MED4Q9NPJ6 270 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TRNAU1APQ9NX07 287 aaKnown RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 TAAR2Q9P1P5 351 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 XPR1Q9UBH6 696 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 EGFL7Q9UHF1 273 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 DCDC2Q9UHG0 476 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 RNF112Q9ULX5 631 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 PLAGL1Q9UM63 463 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 ASF1AQ9Y294 204 aa6.28□□□□□ -1.4
HERC4-210ENST00000480158 TDRKHQ9Y2W6 561 aaKnown RBP6.28□□□□□ -1.4
HERC4-210ENST00000480158 ZNF318Q5VUA4 2279 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 POLR3GO15318 223 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 YY2O15391 372 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 AQP9O43315 295 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 TYROBPO43914 113 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 WISP3O95389 354 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 OAS2P29728 719 aaKnown RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 CRHR1P34998 444 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 BDKRB1P46663 353 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 ARRB1P49407 418 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 CSRP3P50461 194 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 ATXN3P54252 364 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 HNRNPKP61978 463 aaKnown RBP eCLIP6.27□□□□□ -1.41
HERC4-210ENST00000480158 SPEM2Q0P670 501 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 TSTA3Q13630 321 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 LRP8Q14114 963 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 SF3A2Q15428 464 aaKnown RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 ZNF658BQ4V348 819 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 TTC19Q6DKK2 380 aaPredicted RBP6.27□□□□□ -1.41
HERC4-210ENST00000480158 LRRC8EQ6NSJ5 796 aa6.27□□□□□ -1.41
HERC4-210ENST00000480158 KLC3Q6P597 504 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms