RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 MAXP61244 160 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 IL10RBQ08334 325 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 NKG7Q16617 165 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 ZNF766Q5HY98 468 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 ZNF655Q8N720 491 aaPredicted RBP11.42□□□□□ -0.58
USP11-208ENST00000480104 TMEM35BQ8NCS4 154 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 MYRIPQ8NFW9 859 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 RND1Q92730 232 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 N4BP2L2Q92802 583 aaPredicted RBP11.42□□□□□ -0.58
USP11-208ENST00000480104 FKBP10Q96AY3 582 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 SEC16BQ96JE7 1060 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 VPS50Q96JG6 964 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 SPATA32Q96LK8 384 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 PITPNM3Q9BZ71 974 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 DEF6Q9H4E7 631 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 SOX17Q9H6I2 414 aaPredicted RBP11.42□□□□□ -0.58
USP11-208ENST00000480104 WDR54Q9H977 334 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 BEX4Q9NWD9 120 aaPredicted RBP11.42□□□□□ -0.58
USP11-208ENST00000480104 SLC24A2Q9UI40 661 aa11.42□□□□□ -0.58
USP11-208ENST00000480104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.583e-11■■■■■ 49.7
USP11-208ENST00000480104 TRIM64A6NGJ6 449 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 TRIM64BA6NI03 449 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 ARHGEF9O43307 516 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 MYBL2P10244 700 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 ACPPP15309 386 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 VCLP18206 1134 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 CDH5P33151 784 aaPredicted RBP11.41□□□□□ -0.58
USP11-208ENST00000480104 RFC1P35251 1148 aaPredicted RBP11.41□□□□□ -0.58
USP11-208ENST00000480104 PRKAA1Q13131 559 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 CCDC40Q4G0X9 1142 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 KHDC1Q4VXA5 237 aaKnown RBP11.41□□□□□ -0.58
USP11-208ENST00000480104 ARSKQ6UWY0 536 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 CD163Q86VB7 1156 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 TRAPPC5Q8IUR0 188 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 NDUFAF2Q8N183 169 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 SLC20A1Q8WUM9 679 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 CENPIQ92674 756 aaPredicted RBP11.41□□□□□ -0.58
USP11-208ENST00000480104 C8orf44Q96CB5 159 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 ZNF396Q96N95 335 aaPredicted RBP11.41□□□□□ -0.58
USP11-208ENST00000480104 KCTD15Q96SI1 283 aaPredicted RBP11.41□□□□□ -0.58
USP11-208ENST00000480104 MGME1Q9BQP7 344 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 ZFYVE1Q9HBF4 777 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 CRIM1Q9NZV1 1036 aa11.41□□□□□ -0.58
USP11-208ENST00000480104 C2CD4BA6NLJ0 364 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 FZD6O60353 706 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 CELA2AP08217 269 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 PNMA6AP0CW24 399 aaPredicted RBP11.4□□□□□ -0.58
USP11-208ENST00000480104 CD53P19397 219 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 FDXRP22570 491 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 PRDX3P30048 256 aaKnown RBP11.4□□□□□ -0.58
USP11-208ENST00000480104 HSPA9P38646 679 aaKnown RBP11.4□□□□□ -0.58
USP11-208ENST00000480104 PRCPP42785 496 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 PTPN9P43378 593 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 KIR2DL3P43628 341 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 ARSEP51690 589 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 TPI1P60174 286 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 APBA1Q02410 837 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 XRCC4Q13426 336 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 ALS2CLQ60I27 953 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 ATG9BQ674R7 924 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 FAM83HQ6ZRV2 1179 aaPredicted RBP11.4□□□□□ -0.58
USP11-208ENST00000480104 OVCH1Q7RTY7 1134 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 RAVER1Q8IY67 606 aaKnown RBP11.4□□□□□ -0.58
USP11-208ENST00000480104 RPRMLQ8N4K4 120 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 NPWQ8N729 165 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 JOSD2Q8TAC2 188 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 FRMD6Q96NE9 622 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 BDH2Q9BUT1 245 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 SPATA16Q9BXB7 569 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 HES7Q9BYE0 225 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 KIR3DX1Q9H7L2 352 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 FAM60AQ9NP50 221 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 CTSFQ9UBX1 484 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 HRH3Q9Y5N1 445 aa11.4□□□□□ -0.58
USP11-208ENST00000480104 C1orf232A0A0U1RR37 186 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 ASPDHA6ND91 283 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 MAP2K7O14733 419 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 TTI1O43156 1089 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 CDK14O94921 469 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 BMP10O95393 424 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 SERPINA7P05543 415 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 PFKFB1P16118 471 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 KRTAP24-1Q3LI83 254 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 TMEM211Q6ICI0 200 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 KRBA2Q6ZNG9 492 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 COX15Q7KZN9 410 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 CXorf67Q86X51 503 aaPredicted RBP11.39□□□□□ -0.59
USP11-208ENST00000480104 P3H2Q8IVL5 708 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 OR4E2Q8NGC2 313 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 GLYATL1Q969I3 302 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 PDCL3Q9H2J4 239 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 GDPD2Q9HCC8 539 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 KLHL1Q9NR64 748 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 PKD2L2Q9NZM6 624 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 CBLCQ9ULV8 474 aa11.39□□□□□ -0.59
USP11-208ENST00000480104 NSG1A0A0A6YYJ2 146 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 A0A1B0GVL5 298 aa11.38□□□□□ -0.59
USP11-208ENST00000480104 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
USP11-208ENST00000480104 WFS1O76024 890 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms