RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 DPTQ07507 201 aa21.32■■□□□ 1
CCM2-206ENST00000474617 GAB4Q2WGN9 574 aa21.32■■□□□ 1
CCM2-206ENST00000474617 C9orf64Q5T6V5 341 aa21.32■■□□□ 1
CCM2-206ENST00000474617 IL27RAQ6UWB1 636 aa21.32■■□□□ 1
CCM2-206ENST00000474617 C12orf40Q86WS4 652 aa21.32■■□□□ 1
CCM2-206ENST00000474617 C12orf76Q8N812 135 aaPredicted RBP21.32■■□□□ 1
CCM2-206ENST00000474617 FNDC5Q8NAU1 212 aa21.32■■□□□ 1
CCM2-206ENST00000474617 SPDL1Q96EA4 605 aa21.32■■□□□ 1
CCM2-206ENST00000474617 GPATCH1Q9BRR8 931 aaKnown RBP21.32■■□□□ 1
CCM2-206ENST00000474617 TRIM15Q9C019 465 aa21.32■■□□□ 1
CCM2-206ENST00000474617 ABCG8Q9H221 673 aa21.32■■□□□ 1
CCM2-206ENST00000474617 TMEM245Q9H330 911 aa21.32■■□□□ 1
CCM2-206ENST00000474617 EBF3Q9H4W6 596 aa21.32■■□□□ 1
CCM2-206ENST00000474617 ABCD2Q9UBJ2 740 aa21.32■■□□□ 1
CCM2-206ENST00000474617 LEF1Q9UJU2 399 aaPredicted RBP21.32■■□□□ 1
CCM2-206ENST00000474617 PDE10AQ9Y233 779 aa21.32■■□□□ 1
CCM2-206ENST00000474617 ASB1Q9Y576 335 aa21.32■■□□□ 1
CCM2-206ENST00000474617 SERTM1A2A2V5 107 aa21.31■■□□□ 1
CCM2-206ENST00000474617 NR5A2O00482 541 aa21.31■■□□□ 1
CCM2-206ENST00000474617 UGDHO60701 494 aa21.31■■□□□ 1
CCM2-206ENST00000474617 ULK1O75385 1050 aa21.31■■□□□ 1
CCM2-206ENST00000474617 EEDO75530 441 aaKnown RBP21.31■■□□□ 1
CCM2-206ENST00000474617 CLDN9O95484 217 aa21.31■■□□□ 1
CCM2-206ENST00000474617 BAG2O95816 211 aa21.31■■□□□ 1
CCM2-206ENST00000474617 ARSAP15289 507 aa21.31■■□□□ 1
CCM2-206ENST00000474617 HSPA14Q0VDF9 509 aa21.31■■□□□ 1
CCM2-206ENST00000474617 BNIP2Q12982 314 aa21.31■■□□□ 1
CCM2-206ENST00000474617 PRKG2Q13237 762 aa21.31■■□□□ 1
CCM2-206ENST00000474617 ACOX1Q15067 660 aa21.31■■□□□ 1
CCM2-206ENST00000474617 C9orf50Q5SZB4 431 aa21.31■■□□□ 1
CCM2-206ENST00000474617 FBXL19Q6PCT2 694 aa21.31■■□□□ 1
CCM2-206ENST00000474617 RFLNAQ6ZTI6 216 aa21.31■■□□□ 1
CCM2-206ENST00000474617 GLB1L3Q8NCI6 653 aaPredicted RBP21.31■■□□□ 1
CCM2-206ENST00000474617 ELMO1Q92556 727 aa21.31■■□□□ 1
CCM2-206ENST00000474617 HDAC8Q9BY41 377 aa21.31■■□□□ 1
CCM2-206ENST00000474617 CD300AQ9UGN4 299 aa21.31■■□□□ 1
CCM2-206ENST00000474617 CD84Q9UIB8 345 aa21.31■■□□□ 1
CCM2-206ENST00000474617 EIF3LQ9Y262 564 aaKnown RBP21.31■■□□□ 1
CCM2-206ENST00000474617 NPIPB8E9PQR5 432 aa21.3■■□□□ 1
CCM2-206ENST00000474617 ACOT8O14734 319 aa21.3■■□□□ 1
CCM2-206ENST00000474617 LSM1O15116 133 aaKnown RBP21.3■■□□□ 1
CCM2-206ENST00000474617 DNAJA2O60884 412 aa21.3■■□□□ 1
CCM2-206ENST00000474617 BMP1P13497 986 aa21.3■■□□□ 1
CCM2-206ENST00000474617 ACPPP15309 386 aa21.3■■□□□ 1
CCM2-206ENST00000474617 SLC6A12P48065 614 aa21.3■■□□□ 1
CCM2-206ENST00000474617 SEMG2Q02383 582 aa21.3■■□□□ 1
CCM2-206ENST00000474617 TMEM52BQ4KMG9 183 aa21.3■■□□□ 1
CCM2-206ENST00000474617 BCL7AQ4VC05 210 aa21.3■■□□□ 1
CCM2-206ENST00000474617 FAM46CQ5VWP2 391 aa21.3■■□□□ 1
CCM2-206ENST00000474617 Q6ZSR9 355 aa21.3■■□□□ 1
CCM2-206ENST00000474617 KLHDC8AQ8IYD2 350 aa21.3■■□□□ 1
CCM2-206ENST00000474617 PIP4K2CQ8TBX8 421 aa21.3■■□□□ 1
CCM2-206ENST00000474617 NRG4Q8WWG1 115 aa21.3■■□□□ 1
CCM2-206ENST00000474617 SCAMP4Q969E2 229 aa21.3■■□□□ 1
CCM2-206ENST00000474617 FBXL8Q96CD0 374 aa21.3■■□□□ 1
CCM2-206ENST00000474617 DUS3LQ96G46 650 aaKnown RBP21.3■■□□□ 1
CCM2-206ENST00000474617 CCM2Q9BSQ5 444 aa21.3■■□□□ 1
CCM2-206ENST00000474617 SNX6Q9UNH7 406 aa21.3■■□□□ 1
CCM2-206ENST00000474617 YBX2Q9Y2T7 364 aaKnown RBP21.3■■□□□ 1
CCM2-206ENST00000474617 PTGDR2Q9Y5Y4 395 aa21.3■■□□□ 1
CCM2-206ENST00000474617 MUC22E2RYF6 1773 aaPredicted RBP21.3■■□□□ 1
CCM2-206ENST00000474617 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 PRRT4C9JH25 899 aa21.29■■□□□ 1
CCM2-206ENST00000474617 E7ENX8 843 aa21.29■■□□□ 1
CCM2-206ENST00000474617 LIN7AO14910 233 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 AREL1O15033 823 aa21.29■■□□□ 1
CCM2-206ENST00000474617 XRCC1P18887 633 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 JAK1P23458 1154 aa21.29■■□□□ 1
CCM2-206ENST00000474617 FCARP24071 287 aa21.29■■□□□ 1
CCM2-206ENST00000474617 MAP4P27816 1152 aaKnown RBP21.29■■□□□ 1
CCM2-206ENST00000474617 NR6A1Q15406 480 aa21.29■■□□□ 1
CCM2-206ENST00000474617 SHHQ15465 462 aa21.29■■□□□ 1
CCM2-206ENST00000474617 SYTL3Q4VX76 610 aa21.29■■□□□ 1
CCM2-206ENST00000474617 FBXO48Q5FWF7 155 aa21.29■■□□□ 1
CCM2-206ENST00000474617 FAM109BQ6ICB4 259 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 GET4Q7L5D6 327 aaPredicted RBP21.29■■□□□ 1
CCM2-206ENST00000474617 YAF2Q8IY57 180 aa21.29■■□□□ 1
CCM2-206ENST00000474617 OR9I1Q8NGQ6 314 aa21.29■■□□□ 1
CCM2-206ENST00000474617 PYDC1Q8WXC3 89 aa21.29■■□□□ 1
CCM2-206ENST00000474617 SUSD6Q92537 303 aa21.29■■□□□ 1
CCM2-206ENST00000474617 USP7Q93009 1102 aa21.29■■□□□ 1
CCM2-206ENST00000474617 ESAMQ96AP7 390 aa21.29■■□□□ 1
CCM2-206ENST00000474617 TMEM159Q96B96 161 aa21.29■■□□□ 1
CCM2-206ENST00000474617 FOPNLQ96NB1 174 aa21.29■■□□□ 1
CCM2-206ENST00000474617 ACOX2Q99424 681 aa21.29■■□□□ 1
CCM2-206ENST00000474617 KIAA1549LQ6ZVL6 1849 aa21.29■■□□□ 1
CCM2-206ENST00000474617 CCDC154A6NI56 674 aa21.29■■□□□ 1
CCM2-206ENST00000474617 CATP04040 527 aaKnown RBP21.29■■□□□ 1
CCM2-206ENST00000474617 C8BP07358 591 aa21.29■■□□□ 1
CCM2-206ENST00000474617 HSD17B1P14061 328 aa21.29■■□□□ 1
CCM2-206ENST00000474617 CD1EP15812 388 aa21.29■■□□□ 1
CCM2-206ENST00000474617 DPP6P42658 865 aa21.29■■□□□ 1
CCM2-206ENST00000474617 POLR2JP52435 117 aaKnown RBP21.29■■□□□ 1
CCM2-206ENST00000474617 PCDH1Q08174 1060 aa21.29■■□□□ 1
CCM2-206ENST00000474617 RUNX3Q13761 415 aa21.29■■□□□ 1
CCM2-206ENST00000474617 BOP1Q14137 746 aaKnown RBP21.29■■□□□ 1
CCM2-206ENST00000474617 LRRC73Q5JTD7 316 aa21.29■■□□□ 1
CCM2-206ENST00000474617 PPP2R2DQ66LE6 453 aa21.29■■□□□ 1
CCM2-206ENST00000474617 SERPINA13PQ6UXR4 307 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms