RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 PRKCGP05129 697 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 HOXC4P09017 264 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 C1SP09871 688 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ALPIP09923 528 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 NAT2P11245 290 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 HLA-EP13747 358 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ADRB3P13945 408 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 BRAFP15056 766 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ZNF7P17097 686 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 CTPS1P17812 591 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 BMP7P18075 431 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 KRT15P19012 456 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 NR1D1P20393 614 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ITGALP20701 1170 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 LHCGRP22888 699 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 XPAP23025 273 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 CRABP2P29373 138 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 OAS2P29728 719 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 MC4RP32245 332 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 CRHR1P34998 444 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 DRD3P35462 400 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 MMP12P39900 470 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 SKIV2L2P42285 1042 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 SLC1A2P43004 574 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 MAGEA9P43362 315 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 CCT5P48643 541 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 MAGOHP61326 146 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 ITGA9Q13797 1035 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 TESK1Q15569 626 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ZKSCAN8Q15776 578 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 HENMT1Q5T8I9 393 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 PIP5KL1Q5T9C9 394 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 LRRC66Q68CR7 880 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 FAM45BPQ6NSW5 357 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 KYAT3Q6YP21 454 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 SYT13Q7L8C5 426 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 PTAR1Q7Z6K3 402 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 STRA8Q7Z7C7 330 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 RASSF3Q86WH2 238 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 TMPRSS6Q8IU80 811 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 SFTPA1Q8IWL2 248 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 RBM12BQ8IXT5 1001 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 GPR26Q8NDV2 337 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ST13P5Q8NFI4 369 aaPredicted RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 FAM76AQ8TAV0 307 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 FAM45AQ8TCE6 357 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 PPM1EQ8WY54 764 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 TSPAN17Q96FV3 270 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 PDLIM5Q96HC4 596 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 VPS39Q96JC1 886 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 COQ10AQ96MF6 247 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 SMC6Q96SB8 1091 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 AGAP2Q99490 1192 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 AARSD1Q9BTE6 412 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 JAM3Q9BX67 310 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 P2RY12Q9H244 342 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 FAM83DQ9H4H8 585 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 MTG2Q9H4K7 406 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 CCDC134Q9H6E4 229 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 SYTL2Q9HCH5 934 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ZDHHC4Q9NPG8 344 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 PPANQ9NQ55 473 aaKnown RBP5.42□□□□□ -1.54
VPS41-211ENST00000466017 ITM2CQ9NQX7 267 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 PSD3Q9NYI0 1048 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 BCCIPQ9P287 314 aaKnown RBP eCLIP5.42□□□□□ -1.54
VPS41-211ENST00000466017 FZD4Q9ULV1 537 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 ANKRD6Q9Y2G4 727 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 PSAT1Q9Y617 370 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 TICRRQ7Z2Z1 1910 aa5.42□□□□□ -1.54
VPS41-211ENST00000466017 GLYATL1P3A0A0U1RQE8 302 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TRIM49D1C9J1S8 452 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 EIF3FO00303 357 aaPredicted RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 QSOX1O00391 747 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TOR1BO14657 336 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PRMT5O14744 637 aaPredicted RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 WNT9AO14904 365 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 MID1O15344 667 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PLRG1O43660 514 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 UGT1A9O60656 530 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 GLRA3O75311 464 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 AP2A2O94973 939 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ZWINTO95229 277 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 KLF8O95600 359 aaPredicted RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 IL1BP01584 269 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 DNTTP04053 509 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ALDOAP04075 364 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 C2P06681 752 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PIRTP0C851 137 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 DHRS4L1P0CG22 281 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 PKMP14618 531 aaKnown RBP5.41□□□□□ -1.54
VPS41-211ENST00000466017 HOXB2P14652 356 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 STMN1P16949 149 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 GM2AP17900 193 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 KRT4P19013 534 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 TYK2P29597 1187 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 HOXA6P31267 233 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 NUDT1P36639 197 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 P2RY2P41231 377 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 NSG1P42857 185 aa5.41□□□□□ -1.54
VPS41-211ENST00000466017 ETV4P43268 484 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms