RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CD3EAPO15446 510 aaKnown RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 LDB2O43679 373 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 AIREO43918 545 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 FAM20BO75063 409 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CD4P01730 458 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 WARSP23381 471 aaKnown RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 DAPP51397 102 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 PTGR1Q14914 329 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 RFTN2Q52LD8 501 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SETMARQ53H47 684 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CARD16Q5EG05 197 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SIRPB2Q5JXA9 342 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SNAP47Q5SQN1 464 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 MARCH8Q5T0T0 291 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CYP20A1Q6UW02 462 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 RFPL4BQ6ZWI9 263 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CEP68Q76N32 757 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 LRRC8DQ7L1W4 858 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 GALNT7Q86SF2 657 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 TTC16Q8NEE8 873 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 OR13C4Q8NGS5 318 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 NETO1Q8TDF5 533 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 KIAA1191Q96A73 305 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 FUBP1Q96AE4 644 aaKnown RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SLC10A4Q96EP9 437 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CDADC1Q9BWV3 514 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 C14orf119Q9NWQ9 140 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SCN3BQ9NY72 215 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SLC25A37Q9NYZ2 338 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 PCTPQ9UKL6 214 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SNX6Q9UNH7 406 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 POLR3HQ9Y535 204 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 A0A096LPI6 279 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 UBA6A0AVT1 1052 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 ELOVL7A1L3X0 281 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CLDN24A6NM45 220 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 PDZK1P1A8MUH7 402 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CENPBD1B2RD01 187 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 HAT1O14929 419 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 ANKRD28O15084 1053 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 PAGE1O75459 146 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 GLP2RO95838 553 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SERPINA1P01009 418 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 MMP2P08253 660 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 ITGAMP11215 1152 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 GADD45AP24522 165 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 C21orf33P30042 268 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 GRK5P34947 590 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 KRT20P35900 424 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 ERVPABLB-1P60509 514 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 MRPS15P82914 257 aaKnown RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 CYP4F3Q08477 520 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SLC10A7Q0GE19 358 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 IL18R1Q13478 541 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SV2CQ496J9 727 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 RAB41Q5JT25 222 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 GCNT7Q6ZNI0 430 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 REM2Q8IYK8 340 aaPredicted RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 IMP4Q96G21 291 aaKnown RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 OSMRQ99650 979 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SLC25A51Q9H1U9 297 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 SLC6A13Q9NSD5 602 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 EIF2B4Q9UI10 523 aaKnown RBP10.13□□□□□ -0.79
CLIP4-208ENST00000456385 MED16Q9Y2X0 877 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 GMPPBQ9Y5P6 360 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 MCM3APO60318 1980 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 ZNF236Q9UL36 1845 aa10.13□□□□□ -0.79
CLIP4-208ENST00000456385 LOC285556D6RIA3 1793 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 A0A0U1RQS6 177 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 HHLA1C9JL84 531 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ARNTLO00327 626 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 BTN3A1O00481 513 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 DIRAS1O95057 198 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 MOCS2O96007 188 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 PEX11BO96011 259 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 BMP1P13497 986 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 FMO4P31512 558 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 HTR3AP46098 478 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 SUOXP51687 545 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 OR2B6P58173 313 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 MVKQ03426 396 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ARHGAP1Q07960 439 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 FADDQ13158 208 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 CPZQ66K79 652 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 CAPN13Q6MZZ7 669 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 LETMD1Q6P1Q0 360 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 PNCKQ6P2M8 343 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 TTC23LQ6PF05 361 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 IL27RAQ6UWB1 636 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 CCDC71Q8IV32 467 aaPredicted RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 MSRB3Q8IXL7 192 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 MICALL2Q8IY33 904 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 ARRDC4Q8NCT1 418 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 OR8J3Q8NGG0 315 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 BLOC1S5Q8TDH9 187 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 GIPC2Q8TF65 315 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 KLRG1Q96E93 195 aa10.12□□□□□ -0.79
CLIP4-208ENST00000456385 PDLIM5Q96HC4 596 aaKnown RBP10.12□□□□□ -0.79
CLIP4-208ENST00000456385 FCRL2Q96LA5 508 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms