RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 PTPRCAPQ14761 206 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 GPR135Q8IZ08 494 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 NAT14Q8WUY8 206 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 TM9SF4Q92544 642 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 N4BP2L2Q92802 583 aaPredicted RBP23.65■■□□□ 1.38
PMS1-214ENST00000446877 VAT1Q99536 393 aa23.65■■□□□ 1.38
PMS1-214ENST00000446877 GPN3Q9UHW5 284 aaPredicted RBP23.65■■□□□ 1.38
PMS1-214ENST00000446877 COPG1Q9Y678 874 aaKnown RBP23.65■■□□□ 1.38
PMS1-214ENST00000446877 ST6GAL1P15907 406 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 HNRNPH3P31942 346 aaKnown RBP23.64■■□□□ 1.37
PMS1-214ENST00000446877 SSPNQ14714 243 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 MLIPQ5VWP3 458 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 MFSD7Q6UXD7 560 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 MRGPREQ86SM8 312 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 DAAM2Q86T65 1068 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 HOOK3Q86VS8 718 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 RBM41Q96IZ5 413 aaKnown RBP23.64■■□□□ 1.37
PMS1-214ENST00000446877 ARL5AQ9Y689 179 aa23.64■■□□□ 1.37
PMS1-214ENST00000446877 CCDC66A2RUB6 948 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 IFRD1O00458 451 aaPredicted RBP23.63■■□□□ 1.37
PMS1-214ENST00000446877 LDB2O43679 373 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 AKR1B10O60218 316 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 CST8O60676 142 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 SRP72O76094 671 aaKnown RBP23.63■■□□□ 1.37
PMS1-214ENST00000446877 IPO13O94829 963 aaKnown RBP23.63■■□□□ 1.37
PMS1-214ENST00000446877 CD63P08962 238 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 SLC1A1P43005 524 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 MYBPC3Q14896 1274 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 KAZNQ674X7 775 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 ZC3H18Q86VM9 953 aaKnown RBP23.63■■□□□ 1.37
PMS1-214ENST00000446877 ZNF567Q8N184 647 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 GALNT16Q8N428 558 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 TTC13Q8NBP0 860 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 OR4K2Q8NGD2 314 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 HM13Q8TCT9 377 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 P3H4Q92791 437 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 TRAPPC9Q96Q05 1148 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 PITPNM3Q9BZ71 974 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 KLHL25Q9H0H3 589 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 RSPH14Q9UHP6 348 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 CRLS1Q9UJA2 301 aa23.63■■□□□ 1.37
PMS1-214ENST00000446877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.63■■□□□ 1.37
PMS1-214ENST00000446877 C2orf74A8MZ97 194 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 CFAP99D6REC4 459 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 BTN3A3O00478 584 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 BTN3A1O00481 513 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 PECAM1P16284 738 aaPredicted RBP23.62■■□□□ 1.37
PMS1-214ENST00000446877 ZNF449Q6P9G9 518 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 LUZP1Q86V48 1076 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 RHOT2Q8IXI1 618 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 ZADH2Q8N4Q0 377 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 LILRA3Q8N6C8 439 aaPredicted RBP23.62■■□□□ 1.37
PMS1-214ENST00000446877 TFB2MQ9H5Q4 396 aaKnown RBP23.62■■□□□ 1.37
PMS1-214ENST00000446877 TRHDEQ9UKU6 1024 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 PTRH2Q9Y3E5 179 aaKnown RBP23.62■■□□□ 1.37
PMS1-214ENST00000446877 AP1M2Q9Y6Q5 423 aa23.62■■□□□ 1.37
PMS1-214ENST00000446877 KLF7O75840 302 aaPredicted RBP23.61■■□□□ 1.37
PMS1-214ENST00000446877 ANP32AP39687 249 aaKnown RBP23.61■■□□□ 1.37
PMS1-214ENST00000446877 FOLR3P41439 243 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 CDKN2BP42772 138 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 LLGL1Q15334 1064 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 TAF1AQ15573 450 aaPredicted RBP23.61■■□□□ 1.37
PMS1-214ENST00000446877 DCAF10Q5QP82 559 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 CAVIN1Q6NZI2 390 aaKnown RBP23.61■■□□□ 1.37
PMS1-214ENST00000446877 SARM1Q6SZW1 724 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 IGFL3Q6UXB1 125 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 CDHR3Q6ZTQ4 885 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 AMIGO1Q86WK6 493 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 ULK4Q96C45 1275 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 ZNHIT6Q9NWK9 470 aaKnown RBP23.61■■□□□ 1.37
PMS1-214ENST00000446877 FKBPLQ9UIM3 349 aa23.61■■□□□ 1.37
PMS1-214ENST00000446877 C17orf113A0A1B0GUU1 675 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 C5orf60A6NFR6 353 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 GOLGA6L19H0YKK7 550 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 SGTAO43765 313 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 SPOPO43791 374 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 AGTP01019 485 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 PVRP15151 417 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 GLRBP48167 497 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 PRLHRP49683 370 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 ASTE1Q2TB18 679 aaPredicted RBP23.6■■□□□ 1.37
PMS1-214ENST00000446877 OR52E1Q8NGJ3 308 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 HEXDCQ8WVB3 486 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 COPS8Q99627 209 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 FICDQ9BVA6 458 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 MVB12BQ9H7P6 319 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 AGPAT4Q9NRZ5 378 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 IFNKQ9P0W0 207 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 NDOR1Q9UHB4 597 aa23.6■■□□□ 1.37
PMS1-214ENST00000446877 OR2B3O76000 313 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ANXA9O76027 345 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ATXN8OSP0DMR3 200 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 CBSLP0DN79 551 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ATP1B2P14415 290 aaPredicted RBP23.59■■□□□ 1.37
PMS1-214ENST00000446877 CBSP35520 551 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 CD151P48509 253 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 GEMP55040 296 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 DCDP81605 110 aaKnown RBP23.59■■□□□ 1.37
PMS1-214ENST00000446877 C1orf189Q5VU69 101 aa23.59■■□□□ 1.37
PMS1-214ENST00000446877 ZNF385CQ66K41 422 aaPredicted RBP23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms