RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 E7EQ34 232 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 K7EM74 188 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 GPR39O43194 453 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 BUD23O43709 281 aaKnown RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 DNAJB5O75953 348 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 SORBS2O94875 1100 aaKnown RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 DDAH2O95865 285 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 AGTP01019 485 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 POLR2CP19387 275 aaPredicted RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 PTPN7P35236 360 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 ADRA1AP35348 466 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 RORAP35398 523 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 CCL11P51671 97 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 ZNF140P52738 457 aaPredicted RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 RPS18P62269 152 aaKnown RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 FAM199XQ6PEV8 388 aaPredicted RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 DAAM2Q86T65 1068 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 ENDOVQ8N8Q3 282 aaKnown RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 GLIS1Q8NBF1 620 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 N4BP2L2Q92802 583 aaPredicted RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 TLR10Q9BXR5 811 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 CHRNA10Q9GZZ6 450 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 COG4Q9H9E3 785 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 ARNT2Q9HBZ2 717 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 SLAMF7Q9NQ25 335 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 ZDHHC3Q9NYG2 299 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 GPR83Q9NYM4 423 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 MAP4K5Q9Y4K4 846 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 AP1M2Q9Y6Q5 423 aa13.41□□□□□ -0.26
PTPRE-203ENST00000442830 PRRC2CQ9Y520 2896 aaKnown RBP13.41□□□□□ -0.26
PTPRE-203ENST00000442830 ANKRD12Q6UB98 2062 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 IGLV3-16A0A075B6K0 115 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 SLC9B1P1A6NJY1 282 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 H7C0S8 307 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 IPO13O94829 963 aaKnown RBP13.4□□□□□ -0.26
PTPRE-203ENST00000442830 AP2A2O94973 939 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 IPO7O95373 1038 aaKnown RBP13.4□□□□□ -0.26
PTPRE-203ENST00000442830 LCA5LO95447 670 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 PDGFAP04085 211 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 ALPPP05187 535 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 POLBP06746 335 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 RBL1P28749 1068 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 PRDX3P30048 256 aaKnown RBP13.4□□□□□ -0.26
PTPRE-203ENST00000442830 CYLC1P35663 651 aaPredicted RBP13.4□□□□□ -0.26
PTPRE-203ENST00000442830 PTGIRP43119 386 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 XIAPP98170 497 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 PLOD1Q02809 727 aaPredicted RBP13.4□□□□□ -0.26
PTPRE-203ENST00000442830 NCF4Q15080 339 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 ANKRD20A2Q5SQ80 823 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 ANKRD20A1Q5TYW2 823 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 ANKRD20A3Q5VUR7 823 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 CPZQ66K79 652 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 DUS1LQ6P1R4 473 aaKnown RBP13.4□□□□□ -0.26
PTPRE-203ENST00000442830 SYTL1Q8IYJ3 562 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 SSC4DQ8WTU2 575 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 PNPLA2Q96AD5 504 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 SGSM3Q96HU1 749 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 FER1L6-AS2Q96M78 137 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 FERD3LQ96RJ6 166 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 TBL1YQ9BQ87 522 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 SRPK3Q9UPE1 567 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 HIVEP3Q5T1R4 2406 aa13.4□□□□□ -0.26
PTPRE-203ENST00000442830 CCDC66A2RUB6 948 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 F5H423 210 aaPredicted RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 PJA2O43164 708 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 TJP3O95049 919 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 ACRV1P26436 265 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 PSMB4P28070 264 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 SHMT2P34897 504 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 CTNNA1P35221 906 aaKnown RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 VWA5B1Q5TIE3 1220 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 DARS2Q6PI48 645 aaKnown RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 CERS6Q6ZMG9 384 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 AMIGO1Q86WK6 493 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 TMTC1Q8IUR5 882 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 TTC13Q8NBP0 860 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 PROKR1Q8TCW9 393 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 DENND1AQ8TEH3 1009 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 RNF31Q96EP0 1072 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 TCTN2Q96GX1 697 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 SPATA13Q96N96 652 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 ALS2CR12Q96Q35 445 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 SMAD5Q99717 465 aaKnown RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 OR52A5Q9H2C5 316 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 AKIRIN1Q9H9L7 192 aaPredicted RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 PCMTD2Q9NV79 361 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 FAM8A1Q9UBU6 413 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 POLG2Q9UHN1 485 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 GPN3Q9UHW5 284 aaPredicted RBP13.39□□□□□ -0.27
PTPRE-203ENST00000442830 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 PCM1Q15154 2024 aa13.39□□□□□ -0.27
PTPRE-203ENST00000442830 TRBV5-4A0A0C4DH59 114 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 MACROD2A1Z1Q3 448 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 BTN3A1O00481 513 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 KCNN4O15554 427 aa13.38□□□□□ -0.27
PTPRE-203ENST00000442830 PSMD3O43242 534 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms