RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PROSER1Q86XN7 944 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 FBXL6Q8N531 539 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 NPWQ8N729 165 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 CCDC126Q96EE4 140 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 DPEP3Q9H4B8 488 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 RAPGEFL1Q9UHV5 662 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 TBC1D24Q9ULP9 559 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 OR7A10O76100 309 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 POU3F3P20264 500 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 DNAJB1P25685 340 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 DDOSTP39656 456 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF648Q5T619 568 aaPredicted RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZPBP2Q6X784 338 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PTRH1Q86Y79 214 aaKnown RBP7.34□□□□□ -1.23
CPSF6-202ENST00000435070 FAM217AQ8IXS0 508 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PHACTR4Q8IZ21 702 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 OR2T12Q8NG77 320 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 SLC7A6Q92536 515 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 MAGEL2Q9UJ55 1249 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 CLCA2Q9UQC9 943 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 PKP3Q9Y446 797 aa7.34□□□□□ -1.23
CPSF6-202ENST00000435070 ZNF780AO75290 641 aaPredicted RBP7.34□□□□□ -1.24
CPSF6-202ENST00000435070 PRLP01236 227 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 HOXD8P13378 290 aaPredicted RBP7.34□□□□□ -1.24
CPSF6-202ENST00000435070 HTR1EP28566 365 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 NOS2P35228 1153 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 RAB25P57735 213 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 GPAT3Q53EU6 434 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 IDO2Q6ZQW0 420 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 GALNT10Q86SR1 603 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 P3H2Q8IVL5 708 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 CAMKK1Q8N5S9 505 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 FERD3LQ96RJ6 166 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.24
CPSF6-202ENST00000435070 UGT2B28Q9BY64 529 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 ACOXLQ9NUZ1 547 aa7.34□□□□□ -1.24
CPSF6-202ENST00000435070 OR2B3O76000 313 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PDE9AO76083 593 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GSTM1P09488 218 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TGFBR2P37173 567 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 CRISP3P54108 245 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TPI1P60174 286 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 RBBP7Q16576 425 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PLEKHM3Q6ZWE6 761 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 CTU1Q7Z7A3 348 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 CYP4Z2PQ8N1L4 340 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 YIPF7Q8N8F6 280 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 AFF4Q9UHB7 1163 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 RBBP6Q7Z6E9 1792 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 A0A087X1B8 175 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 SMIM30A4D0T7 59 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TLL1O43897 1013 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 DNAJB5O75953 348 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF682O95780 498 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 SLC10A3P09131 477 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ZMYND11Q15326 602 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 STXBP2Q15833 593 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GCNT7Q6ZNI0 430 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ATG16L2Q8NAA4 619 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PEX13Q92968 403 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PTERQ96BW5 349 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GFM1Q96RP9 751 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ITPAQ9BY32 194 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM39BQ9GZU3 492 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 CDT1Q9H211 546 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 DUSP21Q9H596 190 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 NSMCE4AQ9NXX6 385 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 OGDHLQ9ULD0 1010 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 KCNH4Q9UQ05 1017 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GPR45Q9Y5Y3 372 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 USP3Q9Y6I4 520 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 HMGB3O15347 200 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 KRT20P35900 424 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 HNF4AP41235 474 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 LAMTOR4Q0VGL1 99 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 GPR50Q13585 617 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 DDX53Q86TM3 631 aaKnown RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 HIPK1Q86Z02 1210 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 SCN4BQ8IWT1 228 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM199Q8N511 208 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 COPS4Q9BT78 406 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 RETREG1Q9H6L5 497 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 ENPP3O14638 875 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 LZTS3O60299 673 aaPredicted RBP7.33□□□□□ -1.24
CPSF6-202ENST00000435070 VIPP01282 170 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TGM4P49221 684 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 EFR3AQ14156 821 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 BAK1Q16611 211 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 CYP27C1Q4G0S4 372 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 PCID2Q5JVF3 399 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 HECTD2Q5U5R9 776 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TMEM207Q6UWW9 146 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 SLC22A9Q8IVM8 553 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 TIGD4Q8IY51 512 aa7.33□□□□□ -1.24
CPSF6-202ENST00000435070 KIF12Q96FN5 646 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms