RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 AKT1P31749 480 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 RECQLP46063 649 aaPredicted RBP13.42□□□□□ -0.26
THBS3-202ENST00000428962 KRT6CP48668 564 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 RPL38P63173 70 aaKnown RBP13.42□□□□□ -0.26
THBS3-202ENST00000428962 PTSQ03393 145 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 PRKCQQ04759 706 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 PWP1Q13610 501 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 ARHGEF7Q14155 803 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 CNPY1Q3B7I2 92 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 ARHGAP15Q53QZ3 475 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 TMTC4Q5T4D3 741 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 KRT80Q6KB66 452 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 SLC2A7Q6PXP3 512 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 LRRC70Q7Z2Q7 622 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 TRIM46Q7Z4K8 759 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 IFNEQ86WN2 208 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 CARM1Q86X55 608 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 TBC1D21Q8IYX1 336 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 GALNT15Q8N3T1 639 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 MFSD2AQ8NA29 543 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 OR8J3Q8NGG0 315 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 OSCP1Q8WVF1 389 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 HAUS8Q9BT25 410 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 ANKRD60Q9BZ19 345 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 C11orf49Q9H6J7 331 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 SLC24A3Q9HC58 644 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 PNPLA3Q9NST1 481 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 INTS7Q9NVH2 962 aaKnown RBP13.42□□□□□ -0.26
THBS3-202ENST00000428962 KLQ9UEF7 1012 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 PCDHB3Q9Y5E6 796 aa13.42□□□□□ -0.26
THBS3-202ENST00000428962 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ENO4A6NNW6 628 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ANKRD28O15084 1053 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 KPNA5O15131 536 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 CCL16O15467 120 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 KCNH1O95259 989 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 UGT2B4P06133 528 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 MPC1LP0DKB6 136 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 CYP2A6P11509 494 aaPredicted RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 ZNF30P17039 623 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 LHCGRP22888 699 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 GNPDA1P46926 289 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 POLE2P56282 527 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SP140Q13342 867 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ATP13A5Q4VNC0 1218 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 RFTN2Q52LD8 501 aaPredicted RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 BRAT1Q6PJG6 821 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 DPY19L3Q6ZPD9 716 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ADGRG2Q8IZP9 1017 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 PAPD5Q8NDF8 572 aaKnown RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 NAT14Q8WUY8 206 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ZFAND2BQ8WV99 257 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 HBEGFQ99075 208 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 PRPF18Q99633 342 aaKnown RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 CGREF1Q99674 301 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SLC29A1Q99808 456 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 TRIM4Q9C037 500 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SMG9Q9H0W8 520 aaKnown RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 ACTL8Q9H568 366 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SLC32A1Q9H598 525 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 LRTM1Q9HBL6 345 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 ZNF490Q9ULM2 529 aaPredicted RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 AP3M1Q9Y2T2 418 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 CCL27Q9Y4X3 112 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SAC3D1A6NKF1 404 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 CFAP99D6REC4 459 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 NEDD8-MDP1E9PL57 170 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 MANBAO00462 879 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 FFAR3O14843 346 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SLC16A5O15375 505 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 GPR42O15529 346 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 GMNNO75496 209 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 PGM3O95394 542 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 CLDN9O95484 217 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 C1SP09871 688 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 HIST1H2AGP0C0S8 130 aaPredicted RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 MTHFD1P11586 935 aaKnown RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 BMP1P13497 986 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 HIST1H2ADP20671 130 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 OXTRP30559 389 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 GGT5P36269 586 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 GDF5P43026 501 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SPINT3P49223 89 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 RPIAP49247 311 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 HNMTP50135 292 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 APOFQ13790 326 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 DLEU7Q6UYE1 221 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 GDPD4Q6W3E5 623 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SATL1Q86VE3 508 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 FAM9CQ8IZT9 166 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 TNIP2Q8NFZ5 429 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 SLC13A3Q8WWT9 602 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 USP7Q93009 1102 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 HIST1H2AHQ96KK5 128 aa13.41□□□□□ -0.26
THBS3-202ENST00000428962 MAGEB10Q96LZ2 347 aaPredicted RBP13.41□□□□□ -0.26
THBS3-202ENST00000428962 NSMCE2Q96MF7 247 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms